Table 4

Input DNA copy number and genotype call accuracy

Copy number per chamber


0.9

4.5

9

45

90


A1A1

Genotype Count

No Call

50

2


YY

73

121

123

123

123


Call rate

59.3%

98.4%

100%

100%

100%


% Error

0%

0%

0%

0%

0%


A1A2

Genotype Count

No Call

72

4

7


XX

15

18

16


XY

8

80

89

123

123


YY

28

21

11


Call rate

41.5%

96.7%

94.3%

100%

100%


% Error

35%

32%

22%

0%

0%


A2A2

Genotype Count

No Call

39

4


XX

84

119

123

123

123


Call rate

68.3%

96.7%

100%

100%

100%


% Error

0%

0%

0%

0%

0%


Grand No Call

161

10

7

0

0


Grand Error

43

39

27

0

0


Grand Call Rate

56.4%

97.3%

98.1%

100%

100%


Grand % Error

11.7%

10.6%

7.3%

0.0%

0.0%


Wang et al. BMC Genomics 2009 10:561   doi:10.1186/1471-2164-10-561

Open Data