Open Access Highly Accessed Research article

SnoRNAs from the filamentous fungus Neurospora crassa: structural, functional and evolutionary insights

Na Liu1, Zhen-Dong Xiao1, Chun-Hong Yu1, Peng Shao1, Yin-Tong Liang1, Dao-Gang Guan1, Jian-Hua Yang1, Chun-Long Chen2, Liang-Hu Qu1* and Hui Zhou1*

Author Affiliations

1 Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory for Biocontrol, Sun Yat-sen University, Guangzhou 510275, PR China

2 Centre National de la Recherche Scientifique (CNRS), UPR 2167, CGM, Gif sur Yvette, 91198, France

For all author emails, please log on.

BMC Genomics 2009, 10:515  doi:10.1186/1471-2164-10-515

Published: 8 November 2009

Additional files

Additional file 1:

The sequences and accession numbers of the box C/D snoRNAs identified from the N. crassa genome. The data showedall the box C/D snoRNA sequences identified from N. crassa.

Format: PDF Size: 49KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 2:

The sequences and accession numbers of the box H/ACA snoRNAs identified from the N. crassa genome. The data showed all box H/ACA snoRNA sequences identified from N. crassa.

Format: PDF Size: 26KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 3:

Secondary structures of partial N. crassa box H/ACA snoRNAs. The figures present the secondary structures of six representative box H/ACA snoRNAs from N. crassa.

Format: PDF Size: 27KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 4:

Potential base-pairing between box C/D snoRNAs and rRNA (A), snRNA (B) or tRNA (C). The data showed the functional analysis of the N. crassa box C/D snoRNAs.

Format: PDF Size: 39KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 5:

Potential base-pairing between box H/ACA snoRNAs and rRNAs. The data showed the functional analysis of the N. crassa box H/ACA snoRNAs.

Format: PDF Size: 25KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 6:

Strategy for construction of the specialized cDNA libraries enriched in N. crassa box C/D and box H/ACA snoRNAs. The figure shows that the strategy and pipeline for construction of the N. crassa box C/D snoRNA library (A) and box H/ACA snoRNA library (B).

Format: PDF Size: 12KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 7:

Sequences of oligonucleotides and primers used in this study. The data listed all the sequences of oligonucleotides and primers used in this study.

Format: PDF Size: 52KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data