Table 1

Nuclear receptors in Daphnea pulex, Drosophila melanogaster, Homo sapiens and Caenorhabditis elegans.

Group

D. pulex

Protein ID

Scaffold

D. melanogaster

H. sapiens

C. elegans


0A

Dappu-KNR-R1

290673

43

KNI

Dappu-KNR-R2

290668

43

KNRL

EGON

0B

DAX1

SHP

1A

THRa

THRb

1B

RARa

RARb

RARg

1C

PPARa

PPARb

PPARg

1D

Dappu-E75

442814

1

E75

Rev-erb-a

NHR85

Rev-erb-b

1E

Dappu-E78

442769

23

E78

1F

Dappu-HR3

442731

5

DHR3

RORa

NHR23

RORb

RORg

1G

CNR14

1H

Dappu-EcRa

319648

30

EcR

LXRa

Dappu-EcRb

442737

135

LXRb

FXR

1I

VDR

PXR

CAR1

1J

Dappu-HR96

442778

2

DHR96

DAF12

NHR8

NHR48

1K

NHR1

1L

Dappu-HR97a

442812

28

Dappu-HR97b

442724

28

Dappu-HR97 g

442655

40

1 M1

Dappu-HR10

442777

17

1N1

Dappu-HR11

316465

193

2A

Dappu-HNF4

442738

80

HNF4

HNF4

NHR49

HNF4G

NHR64

NHR69

2B

Dappu-RXR

442727

328

USP

RXRa

RXRb

RXRg

2C

TR2

TR4

2D

Dappu-HR78

442757

58

DHR78

NHR41

2E

Dappu-TLL

442885

2

TLL

TLX

FAX1

Dappu-PNR

442739

45

PNR

PNR

Dappu-DSF

442884

23

DSF

NHR67

FAX-1

2F

Dappu-SVP

442743

4

SVP

COUP-TFa

UNC55

COUP-TFb

EAR2

3A

ERa

ERb

3B

Dappu-ERR

442810

11

ERR

ERRa

ERRb

ERRg

3C

GR

MR

PR

AR

4A

Dappu-HR38

442749

2

DHR38

NGFIB

CNR8

NURR1

NOR1

5A

Dappu-FTZ-F1

442811

39

FTZ-F1

SF1

NHR25

LRH1

5B

Dappu-HR39

442817

61

DHR39

6A

Dappu-HR4

442822

145

DHR4

GCNF

NHR91

Total

25

21

48

284


Known receptor members for each nuclear receptor subfamily group are listed and compared to corresponding D. pulex nuclear receptors, including manual annotated protein identification number (Protein ID) and scaffold identity. Receptor group designations are based upon nomenclature adopted by the Nuclear Receptors Nomenclature Committee [3].

Thomson et al. BMC Genomics 2009 10:500   doi:10.1186/1471-2164-10-500

Open Data