Table 5

Genes showing increased expression in stumpy BF as compared to slender BF

description

Genes (fold change, stumpy signal)


aquaporin 3

Tb927.6.1520 (1.67, 17418)

ESAG4

Tb11.03.0990 (2.65, 7195)

ESAG9

Tb927.1.5220 (4.68, 6148), Tb927.5.120 (3.86, 14115), Tb927.5.4620 (2.06, 3102), Tb927.7.170 (2.59, 24058), Tb09.160.5400 (6.63, 43669), Tb09.160.5430 (5.41, 6467), Tb09.v1.0330 (30,49, 25309), Tb11.1000 (4.20, 9262)

glutamate dehydrogenase

Tb09.160.4310 (2.43, 12969)

GPEET2 procyclin

Tb927.6.510 (8.51, 7966)

hypothetical conserved

Tb927.2.2140 (3.16, 3032), Tb927.6.4270 (1.98, 6654), Tb927.7.4270 (2.49, 13877), Tb09.160.0465 (2.61, 14430), Tb09.211.1620 (1.90, 8475), Tb09.v1.0490 (2.18, 28015), Tb10.389.1860 (2.22, 6264)

hypothetical conserved, aminotransferase domain

Tb927.4.2240 (2.16, 13035)

hypothetical conserved, ESAG9-like

Tb09.142.0370 (7.52, 7916), Tb09.142.0380 (2.63, 18446)

hypothetical protein

Tb09.v4.0151 (3.39, 27898), Tb10.70.2840 (2.57, 9259), Tb10.70.2850 (3.58, 3685)

major facilitator superfamily protein, PAD2

Tb927.7.5940 (2.04, 36576)

mitochondrial processing peptidase alpha subunit

Tb11.02.1480 (2.01, 9711)

2-oxoglutarate dehydrogenase E2 component

Tb11.01.3550 (2.29, 11013)

protein phosphatase with EF-Hand domains

Tb927.8.1130 (2.24, 9691)

purine nucleoside transporter

Tb09.160.5480 (2.34, 30007)

pyruvate dehydrogenase complex E3 binding protein

Tb10.70.5380 (2.10, 13843)

RNA-binding protein RBP5

Tb11.01.3915 (2.85, 9818)

serine/threonine-protein kinase NrkA

Tb927.8.6930 (1.78, 30611)

succinyl-coA:3-ketoacid coA transferase mitochondrial

Tb11.02.0290 (1.86, 22800)

transketolase

Tb927.8.6170 (2.16, 4917)

transporter

Tb10.61.2747 (1.79, 9346)

VSG-related VR2.1

Tb11.01.4560 (2.48, 18586)


a Fold-change as calculated by SAM analysis is shown; some genes showed 2-fold difference in Tukey means.

Jensen et al. BMC Genomics 2009 10:482   doi:10.1186/1471-2164-10-482

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