Table 4

Genes showing increased expression in slender BF as compared to stumpy BFa

description

Genes (fold changea, slender signal)


adenylate kinase

Tb927.2.5660 (2.09, 12440)

alanine aminotransferase

Tb927.1.3950 (1.96, 10266)

amino acid transporter 8

Tb927.4.4860 (2.25, 11460)

cAMP-specific phosphodiesterase, PDEB1

Tb09.160.3590 (2.01, 6849)

clathrin heavy chain

Tb927.3.930 (2.12, 10381), Tb10.70.0830 (2.1, 13711), Tb10.70.1720 (1.90, 4250)

ESAG8

H25N7.22 (2.16, 15567)

flagellar axoneme protein PF16

Tb927.1.2670 (1.91, 15581)

flagellar component PACRGA

Tb927.3.2310 (1.74, 11680)

glycerol-3-phosphate dehydrogenase

Tb11.02.5280 (2.19, 28619)

haptoglobin-hemoglobin receptor

Tb927.6.440 (2.08, 14824)

histone H2A

Tb927.7.6360 (2.31, 4541)

hypothetical

Tb927.5.4010 (2.76, 18891), Tb05.5K5.220 (2.16, 8815), Tb927.8.7970 (2.65, 20178), Tb10.70.4020 (1.92, 7584), N19B2.190 (3.13, 7132)

hypothetical conserved

Tb927.1.4310 (2.39, 16196), Tb927.3.1910 (1.92, 6794), Tb927.4.2740 (2.36, 20142), Tb927.4.4580 (2.28, 9393), Tb927.4.4690 (1.93, 16059), Tb927.4.4700 (2.08, 10495), Tb927.5.2950 (1.83, 12001), Tb927.6.3180 (1.88, 12401), Tb927.7.6910 (2.36, 11887), Tb927.8.1550 (2.26, 16363), Tb927.8.3820 (2.09, 4078), Tb927.8.6660 (1.76, 26059), Tb10.389.0720 (2.70, 14817), Tb10.61.2210 (2.95, 9224), Tb10.61.3130 (2.03, 15809), Tb10.6k15.0710 (1.84, 8318), Tb10.70.4030 (1.96, 13839), Tb10.70.5560 (2.26, 11345), Tb10.70.7280 (1.76, 12000), Tb11.01.2700 (2.40, 6975), Tb11.01.4030 (1.73, 21437), Tb11.01.6470 (2.52, 17105), Tb11.02.0810 (1.91, 5728), Tb11.02.1660 (2.32, 10253), Tb11.02.4380 (1.97, 14847), Tb11.02.4400 (1.76, 21856)

hypothetical conserved, EF hand

Tb09.211.4820 (2.12, 6022)

hypothetical conserved, TPR repeats

Tb11.03.0240 (1.89, 18392)

hypothetical conserved, WD40 repeat

Tb09.211.4280 (1.99, 6137), Tb10.70.7320 (2.09, 12025), Tb11.02.5550 (2.01, 8496)

hypothetical conserved, zinc finger

Tb10.389.0740 (2.97, 15526), Tb11.01.8270 (1.99, 19491)

hypoxanthine-guanine phosphoribosyltransferase

Tb10.70.6660 (2.01, 12965)

inosine-adenosine-guanosine-nucleoside hydrolase

Tb927.3.2960 (2.06, 16716)

64 kDa invariant surface glycoprotein

Tb927.5.1410 (2.49, 8554), Tb927.5.1430 (2.02, 11573)

iron superoxide dismutase

Tb11.01.7550 (2.26, 11504)

leucine-rich repeat protein

Tb927.8.3790 (2.21, 6720)

mitochondrial carrier protein

Tb927.5.1550 (2.00, 5469)

mitochondrial DNA ligase homolog

Tb927.7.610 (1.96, 15064)

paraflagellar rod component

Tb11.01.5100 (2.08, 19728)

paraflagellar rod protein

Tb11.01.6740 (1.93, 17955)

phosphoglycerate kinase, glycosomal

Tb927.1.700 (2.19, 35215)

protein kinase

Tb11.01.4230 (2.55, 8847)

protein kinase, Aurora kinase AUK2

Tb927.3.3920 (1.97, 4982)

pumillio RNA binding protein PUF9

Tb927.1.2600 (2.39, 16018)

pyruvate kinase 1

Tb10.61.2680 (2.08, 29931)

RNA-binding protein

Tb11.01.3940 (2.28, 5191)

serine/threonine protein phosphatase

Tb05.5K5.30 (1.96, 5681)

SNF2 DNA repair protein

Tb927.7.4650 (1.96, 8894)


a Fold-change as calculated by SAM analysis are shown; some genes showed 2-fold difference in Tukey means.

Jensen et al. BMC Genomics 2009 10:482   doi:10.1186/1471-2164-10-482

Open Data