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Open Access Research article

Widespread variation in transcript abundance within and across developmental stages of Trypanosoma brucei

Bryan C Jensen1, Dhileep Sivam12, Charles T Kifer1, Peter J Myler123 and Marilyn Parsons13*

Author Affiliations

1 Seattle Biomedical Research Institute, 307 Westlake Ave. North, Seattle, WA, 98109 USA

2 Department of Medical Education and Biomedical Informatics, University of Washington, Seattle, WA, 98195 USA

3 Department of Global Health, University of Washington, Seattle, WA, 98195 USA

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BMC Genomics 2009, 10:482  doi:10.1186/1471-2164-10-482

Published: 19 October 2009

Additional files

Additional file 1:

Growth curve for PF. Growth curve showing cell densities at time of harvest of procyclic forms.

Format: PDF Size: 58KB Download file

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Additional file 2:

Microarray gene level data. Expression data and attributes for all nuclear genes on the array (data) plus key describing column headers (key).

Format: XLS Size: 4.8MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 3:

File 4 Most highly regulated genes. Listing of the most highly regulated nuclear genes, including changes in gene expression compared to the mean expression level across all conditions (data), plus key describing column headings (key).

Format: XLS Size: 133KB Download file

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Additional file 4:

cBF vs PF log. Genes differentially expressed in cBF versus PF-log

Format: XLS Size: 128KB Download file

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Additional file 5:

Slender BF vs cBF. Genes differentially expressed in cBF versus slender BF

Format: PDF Size: 30KB Download file

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Additional file 6:

PF-log vs PF-stat. Genes differentially expressed in PF-log versus PF-stat

Format: XLS Size: 174KB Download file

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Additional file 7:

Maxicircle genes. Expression data for mitochondrial maxicircle genes

Format: XLS Size: 32KB Download file

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Additional file 8:

VSGs and ESAGs. Individual sample expression data for VSG and ESAG genes

Format: XLS Size: 148KB Download file

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Additional file 9:

Genes not on array. Listing of genes for which array data was not obtained (data) plus key describing column headers (key).

Format: XLS Size: 52KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data