Additional file 3.
Validation of candidate SNPs by genotyping a panel consisting of 96 turkeys. The 96 animals included the six turkeys from which the pooled DNA sample for SNP discovery was prepared. Listed are the 324 polymorphic SNPs out of 340 predicted SNPs that resulted in a working assay. For all SNPs, the minor allele frequencies (MAF) were calculated for the group of six turkeys from which the pooled DNA sample was prepared and for the total panel. Also, the fraction of individuals heterozygous for an SNP locus was calculated.
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Kerstens et al. BMC Genomics 2009 10:479 doi:10.1186/1471-2164-10-479