Research article
Oligonucleotide array discovery of polymorphisms in cultivated tomato (Solanum lycopersicum L.) reveals patterns of SNP variation associated with breeding
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* Corresponding author: David M Francis francis.77@osu.edu
1 Department of Horticulture and Crop Science, The Ohio State University, Ohio Agricultural Research and Development Center, 1680 Madison Ave, Wooster, OH 44691, USA
2 Syngenta Biotechnology, Inc, 3054 East Cornwallis Road, Research Triangle Park, NC 27709, USA
BMC Genomics 2009, 10:466 doi:10.1186/1471-2164-10-466
Published: 9 October 2009Additional files
Additional file 1:
SNP variation for three tomato varieties, FL7600, OH9242, and PI114490 used in SFP discovery. The data includes locus names and SNP positions, flanking sequences, and primers.
Format: XLS Size: 108KB Download file
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Additional file 2:
InDel variation for three tomato varieties, FL7600, OH9242, and PI114490 used in SFP discovery. The data includes locus names and InDel positions, flanking sequences, and primers.
Format: XLS Size: 31KB Download file
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Additional file 3:
Description and SNP genotypes of plant materials used in this study. The data includes categorical details of 92 tomato varieties and accessions with genotypes at 46 loci.
Format: XLS Size: 85KB Download file
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Additional file 4:
Summary of allelic diversity analysis at 51 loci. The summary shows allelic diversity of 92 tomato varieties and accessions divided into five groups, fresh-market, processing, vintage, landrace, and wild species.
Format: XLS Size: 35KB Download file
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