Table 9 |
||
|
Words not detected in the 3'UTRs |
||
|
#WORD |
E_S |
E |
|
|
||
|
CTAGCAGG |
5.98269 |
6.17391 |
|
|
||
|
ACTGCCAG |
4.99319 |
5.1526 |
|
|
||
|
CGCCTGAT |
4.97776 |
5.13667 |
|
|
||
|
GCGTCCGA |
4.52742 |
4.67187 |
|
|
||
|
GGGGTGGC |
4.5248 |
4.66917 |
|
|
||
|
ACTCCGCC |
4.38831 |
4.5283 |
|
|
||
|
CCCGTTCC |
4.25101 |
4.3866 |
|
|
||
|
ACACGCCG |
4.21714 |
4.35165 |
|
|
||
|
CCCGCTCA |
4.193 |
4.32673 |
|
|
||
|
CTGGGCGT |
4.06873 |
4.19847 |
|
|
||
|
GACCTGCG |
3.71851 |
3.83704 |
|
|
||
|
GCGCAGTA |
3.68699 |
3.80451 |
|
|
||
|
GCACCCGA |
3.6084 |
3.7234 |
|
|
||
|
GCACCCTC |
3.59671 |
3.71134 |
|
|
||
|
CGCACCCA |
3.54333 |
3.65625 |
|
|
||
|
CCGCCGTC |
3.53385 |
3.64646 |
|
|
||
|
GGGTCGGC |
3.52406 |
3.63636 |
|
|
||
|
GCACGCCT |
3.35465 |
3.46154 |
|
|
||
|
GCGCAGCC |
3.31181 |
3.41732 |
|
|
||
|
CGTCCGCT |
3.28252 |
3.3871 |
|
|
||
|
CTGGCGCC |
3.2624 |
3.36634 |
|
|
||
|
GGCGACCT |
3.25626 |
3.36 |
|
|
||
|
ATACGCCC |
3.18816 |
3.28972 |
|
|
||
|
AGCGCTCC |
2.98494 |
3.08 |
|
|
||
|
TAGCGCGG |
2.98494 |
3.08 |
|
|
||
|
Top 25 words that were expected to occur in the 3'UTR but are not part of the sequences. Each word is identified through is nucleotide sequence and contains information about the expected number of sequences it was computed to occur in (E_S) as well as the expected number of total occurrences in the set of sequences (E). The words are sorted by their expected sequence occurrence. |
||
|
Lichtenberg et al. BMC Genomics 2009 10:463 doi:10.1186/1471-2164-10-463 |
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