Table 1

Identified known (or conserved) candidate miRNA families in Gossypium hirsutum wildtype (WT) and fuzz/lintless mutant (M) ovules.

miRNA Family

Sequence Reads

Ratio


WT

M

(WT/M)


156/157

96705

94568

1.0

**

159*

642

949

0.7

**

160

46

129

0.4

**

162

542

762

0.7

**

164

8183

6863

1.2

**

165/166

4951

11909

0.4

**

167

293960

545537

0.5

**

168

1633

1208

1.4

**

169

523

441

1.2

**

170*

1

1

1.0

171

433

750

0.6

**

172

83392

147672

0.6

**

319*

1

4

0.3

390

2258

2518

0.9

**

393

93

184

0.5

**

394

232

313

0.7

**

395

150

56

2.7

**

396

155

191

0.8

**

397

137

42

3.3

**

398

7

1

7.0

399

1222

202

6.0

**

403

13

21

0.6

**

408

16

31

0.5

**

472

1

2

0.5

473*

10

4

2.5

477*

0

1

0.0

479*

9

0

x

**

482

3

6

0.5

530*

17

36

0.5

**

535*

634

1115

0.6

**

827

65

47

1.4

829

0

1

0.0

858*

13

10

1.3

894*

607

785

0.8

**


*Newly identified miRNAs from Gossypium hirsutum. **p < 0.01.

Kwak et al. BMC Genomics 2009 10:457   doi:10.1186/1471-2164-10-457

Open Data