BMC Genomics

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Open Access Highly Access Research article

Positive correlation between gene coexpression and positional clustering in the zebrafish genome

Yen Kaow Ng1, Wei Wu2 and Louxin Zhang1*

Author Affiliations

1 Department of Mathematics, National University of Singapore, 2 Science Drive 2, Singapore 117543, Singapore

2 Institute of Molecular and Cell Biology, Singapore 138673, Singapore

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BMC Genomics 2009, 10:42 doi:10.1186/1471-2164-10-42

Published: 22 January 2009

Additional files

Additional file 1:

Analysis of non-zero positive mean R value in randomized genome and other discussions. It contains the analysis of mean R in randomized genome and other studies relevant to, but not written in this manuscript.

Format: PDF Size: 114KB Download file

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Open Data

Additional file 2:

Coexpression analysis of genes with GO classes. It contains spreadsheet data from analysis of coexpression of genes within GO classes.

Format: XLS Size: 127KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 3:

Positional gene clusters together with their p-values and co expression mean R. It contains the analysis of positional gene clusters for D = 25K with/without tandem duplicated genes.

Format: XLS Size: 948KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 4:

Positional clusters formed by genes with GO classes. It contains spreadsheet data from analysis of positional clusters that are composed of genes within GO classes.

Format: XLS Size: 270KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data