Additional file 6.
List of all miRNAs in five large genomic clusters enriched in differentially regulated miRNAs. Increasing Expression - list of miRNAs from two genomic clusters on Chromosome 12. These clusters are enriched in miRNA with an average expression trend increasing between all consecutive time-points. Decreasing Expression - list of miRNAs from a genomic cluster on Chromosome 14 and two on Chromosome X enriched in miRNA with an average expression trend decreasing between all consecutive timepoints. Numbers in parentheses show chromosomal coordinates of the first and last miRNAs in a genomic cluster. Letters in parentheses refer to the expression of a miRNA: (I) - average trend increasing between all consecutive timepoints; (D) - average trend decreasing between all consecutive timepoints; (s) -no significant differential expression; (e) - average trend is not included in the above categories. Available information concerning associated genomic features and potential regulatory sites: TSS - transcription start site; CpG - CpG island evidence; cDNA - experimental EST evidence; polyA - polyadenylation evidence; Regulatory Information - experimental evidence from functional genomics database of Ensembl.
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Manakov et al. BMC Genomics 2009 10:419 doi:10.1186/1471-2164-10-419