Table 7 |
||||
|
New microsatellite markers developed from the chicken genome assembly (galGal3, http://genome.ucsc.edu/cgi-bin/hgGateway webcite). |
||||
|
Marker name |
Position (galGal3 assembly) |
Upper primer |
Lower primer |
PCR annealing T° |
|
|
||||
|
SEQALL0348 |
chr1:135392697-135392876 |
GCTCAGCACCTCCTCCTC |
AGAAAGCAGCCTCACAAAGC |
55°C |
|
SEQALL0349 |
chr1:135543677-135543882 |
AGGGTTTCCAAGTGGTGTTG |
ACCTTGCCTGAGACTGGTG |
55°C |
|
SEQALL0350 |
chr1:135576325-135576564 |
CGACAGATGGTCAAGAATGG |
ACACAGTTCTTCGCTGTACG |
55°C |
|
SEQALL0468 |
chr1:64162253-64162451 |
TTGCCATTCGAAACATCAAC |
GGACTCTGCTGTGCCAAATAC |
50°C |
|
SEQALL0469 |
chr1:64480773-64480997 |
TGAGATGATGAATGGCTTGG |
ATATGCAGCAGGGCTCATTC |
58°C |
|
SEQALL0470 |
chr1:72300927-72301126 |
CACAGGTCCACGAGAAAAGG |
TGCAGTCCTTCACATTCTGC |
58°C |
|
SEQALL0471 |
chr1:78494600-78494914 |
AGCATCATGACAGTCCAACC |
AGGCCAAATTGTCTCACTCG |
58°C |
|
SEQALL0472 |
chr6:24021693-24022070 |
ATCATGCGGCAGAAAAAGAG |
AAATCCATCAGCCTGACAGC |
50°C |
|
SEQALL0473 |
chr6:24772426-24772628 |
GAGAGGGAGGGAGATGAAGG |
GAAGAGCTCGTGCAAAAAGC |
58°C |
|
SEQALL0474 |
chr6:25154425-25154640 |
TAGGGTTTGGCTGTTGTCTG |
CATTTGGAAACCCAGAGCAG |
58°C |
|
SEQALL0475 |
chr15:4463535-4463868 |
ACAGGATGCTGCTGCTCAC |
AATGTTTCCCTTTCCCAACC |
58°C |
|
SEQALL0476 |
chr15:8651118-8651325 |
AGCCAAATCCTGTTTCATGC |
TGTCCTTTCTGGGAGAGACG |
58°C |
|
SEQALL0477 |
chr15:9172235-9172553 |
CATCCAAGTAACCCCACCTG |
TGTAAGGTGTAGGGCGTTGG |
58°C |
|
SEQALL0478 |
chr1:72181285-72181516 |
TGGCTTATGGCAACAAAAATC |
TGGCCGGTAGTGGATAAAAG |
58°C |
|
SEQALL0479 |
chr1:68536797-68537124 |
GATGTTCCTGGCACTTATAGGG |
TTTCCCTTTGTTTCTGCATCC |
58°C |
|
SEQALL0481 |
chr1:142664771-142665102 |
GCAGCTGCTGTTCCACAAG |
GCTCATTGCATTTTTGCTTTC |
58°C |
|
SEQALL0482 |
chr2:88572048-88572376 |
GGAAGTGTGTGTTATGGACTGG |
CTAGGCTGGAACTGGCAGTAG |
58°C |
|
SEQALL0483 |
chr2:90911596-90911826 |
TCTTGGAGATCACGGGAAAG |
TGCAACATCAGGACAAGAGG |
58°C |
|
SEQALL0484 |
chr6:5752041-5752395 |
CGAGTCTGCTGAATGGACAC |
GCGCAATTAATTCAGGAAGG |
58°C |
|
SEQALL0485 |
chr6:6245960-6246304 |
GACCACACAGTCACACGTCAG |
TCTGGAGGAAGCAATAAGAAGTG |
58°C |
|
SEQALL0486 |
chr6:25680338-25680656 |
TTCCCCAGGTGCTCTATCAG |
ACCATCGTCTCCTGCCATAG |
58°C |
|
|
||||
|
Pinard-van der Laan et al. BMC Genomics 2009 10:31 doi:10.1186/1471-2164-10-31 |
||||
