Table 3

Unique Pfam domains and their occurrence among Hmrbase entries

Peptide Hormone

Receptor


Serial no.

Pfam Domain Name

Frequency

Pfam Domain Name

Frequency


1.

Insulin

253

zf-C4

1593


2.

Hormone_1

170

Hormone_recep

1459


3.

ACTH_domain

166

7tm_1

824


4.

Op_neuropeptide

156

7tm_2

129


5.

Hormone_2

144

HRM

119


6.

Gastrin

96

LRR_1

42


7.

Cys_knot

78

fn3

34


8.

Somatostatin

55

DUF1856

13


9.

Hormone_6

54

EGF

7


10.

Thymosin

46

EGF_CA

7


11.

Crust_neurohorm

45

Laminin_G_2

6


12.

Hormone_3

33

Laminin_G_1

6


13.

CRF

24

Furin-like

4


14.

Motilin_assoc

20

Recep_L_domain

4


15.

Motilin_ghrelin

20

Ldl_recept_a

4


16.

ELH

18

Calsequestrin

1


17.

Bombesin

11

Homeobox

1


18.

TRH

10

Thioredoxin

1


19.

Hormone_5

9


20.

Adipokin_hormo

8


21.

Eclosion

3


22.

Crust_neuro_H

2


Frequency of a domain is the number of entries in Hmrbase database harboring that domain.

Rashid et al. BMC Genomics 2009 10:307   doi:10.1186/1471-2164-10-307

Open Data