Table 5

Homology of the new TTSS system with proteins in GenBank

Locus tag

Protein

Organism

Score

E-value


pau03443

Hypothetical Protein YPK_0252

Yersinia pseudotuberculosis

44.3

0.004

pau03444

hypothetical protein A55_B0283

Vibrio cholerae

97.1

5.00E-019

pau03445

putative adhesion protein

Vibrio parahaemolyticus

152

1.00E-035

pau03446

hypothetical protein A55_B0283

Vibrio cholerae

263

5.00E-069

pau03447

hypothetical protein A59_1855

Vibrio cholerae

77

5.00E-013

pau03448

peptidoglycan-associated lipoprotein

Vibrio cholerae

251

1.00E-065

pau03449

putative adhesion protein

Vibrio parahaemolyticus

378

9.00E-104

pau03450

putative type III secretion system apparatus protein VcrD2

Vibrio parahaemolyticus

686

0

pau03451

hypothetical protein A55_B0283

Vibrio cholerae

157

2.00E-037

pau03452

hypothetical protein A55_B0283

Vibrio cholerae

169

6.00E-041

pau03453

putative adhesion protein

Vibrio parahaemolyticus

87

5.00E-016

pau03454

hypothetical protein VPA1359

Vibrio parahaemolyticus

164

2.00E-039

pau03455

hypothetical protein VCB_002823

Vibrio cholerae

107

5.00E-022

pau03456

hypothetical protein A55_B0283

Vibrio cholerae

169

8.00E-041

pau03457

putative type III secretion system translocon protein VopB2

Vibrio parahaemolyticus

278

9.00E-074

pau03458

putative adhesion protein

Vibrio parahaemolyticus

239

8.00E-062

pau03459

putative adhesion protein

Vibrio parahaemolyticus

253

4.00E-066

pau03460

putative two-component response regulator

Vibrio parahaemolyticus

174

2.00E-042

pau03461

peptidoglycan-associated lipoprotein

Vibrio cholerae

87

5.00E-016

pau03462

peptidoglycan-associated lipoprotein

Vibrio cholerae

206

6.00E-052

pau03463

putative adhesion protein

Vibrio parahaemolyticus

88.2

2.00E-016

pau03464

peptidoglycan-associated lipoprotein

Vibrio cholerae

117

3.00E-025

pau03465

DNA topoisomerase I

Vibrio cholerae

84

4.00E-015

pau03466

putative type III secretion apparatus protein

Vibrio parahaemolyticus

101

2.00E-020

pau03467

ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain containing protein

Tetrahymena thermophila

40.8

0.043

pau03468

putative adhesion protein

Vibrio parahaemolyticus

88.2

2.00E-016

pau03469

Flagellar biosynthesis/type III secretory pathway ATPase

Vibrio cholerae

696

0

pau03470

putative type III secretion system apparatus protein VscC2

Vibrio parahaemolyticus

639

0

pau03471

NO HITS

NO HITS

pau03472

DNA topoisomerase I

Vibrio cholerae

217

3.00E-055

pau03473

putative type III secretion system apparatus protein VscR2

Vibrio parahaemolyticus

226

4.00E-058

pau03474

hypothetical protein A55_2001

Vibrio cholerae

89.7

8.00E-017


Wilkinson et al. BMC Genomics 2009 10:302   doi:10.1186/1471-2164-10-302

Open Data