Research article
Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays
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* Corresponding author: Amy A Caudy acaudy@princeton.edu
- † Equal contributors
1 Department of Molecular Biology, Princeton University, New Jersey, USA
2 Department of Computer Science, Princeton University, New Jersey, USA
3 Lewis-Sigler Institute of Integrative Genomics, Princeton University, New Jersey, USA
4 Department of Ecology and Evolutionary Biology, Princeton University, New Jersey, USA
5 Howard Hughes Medical Institute, Princeton University, New Jersey, USA
BMC Genomics 2009, 10:221 doi:10.1186/1471-2164-10-221
Published: 12 May 2009Additional files
Additional File 1:
Table S1 – Read Utilization. Table S2 – Unique Read Origin.Table S3 – Multiple Read Origin. Table S4 – Correlations of Differential Gene Expression Between Illumina 1 G and Agilent Arrays. Tables of Illumina sequencing read utilization and read origin. Correlations of differential gene expression, with and without thresholding on read coverage.
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