Additional file 1.

Supplementary figures and tables. Additional file 1 contains all supplementary figures and tables. Figure S1 – Correlation between gene expression levels measured by Affymetrix arrays. Figure S2 – Correlation between gene expression levels measured by RNA-Seq. Figure S3 – Correlation between gene expression levels measured by Affymetrix arrays and RNA-Seq at different sequencing depth. Figure S4 – Correlation between protein and mRNA expression levels measured by Affymetrix arrays or RNA-Seq using different ways to compute mRNA expression level. Figure S5 – Correlation between mRNA expression levels measured by Affymetrix arrays or RNA-Seq and protein expression levels in two technical replicates. Table S1 – Sample information. Table S2 – Total numbers of sequences in the four sequencing experiments. Table S3 – Correlations between gene expression levels measured by Affymetrix array and RNA-Seq. Table S4 – Correlation between protein expression levels and mRNA expression levels measured by Affymetrix arrays and RNA-Seq.

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Fu et al. BMC Genomics 2009 10:161   doi:10.1186/1471-2164-10-161