Table 1

Chromosomal positions and gene locations of the 14 CYP7A1 SNPs

#

SNP ID

Chromosome position

Location in CYP7A1 gene

Variation* Allele 1/2


1

rs10504255

59448422

3'-downstream

A/G

2

rs10957057

59450301

3'-downstream

C/T

3

rs8192879

59453537

3'-UTR

C/T

4

rs11786580

59455901

Intron 4

C/T

5

rs3747809

59456945

Intron 4

T/C

6

rs1457043

59460400

Intron 2

T/C

7

rs2162459

59461003

Intron 1

A/G

8

rs3808607

59462885

5'-upstream

T/G

9

rs3824260

59463151

5'-upstream

G/A

10

rs7833904

59467623

5'-upstream

T/A

11

rs3903445

59468303

5'-upstream

G/T

12

rs1125226

59469472

5'-upstream

A/C

13

rs1023649

59470379

5'-upstream

A/G

14

rs1023652

59470577

5'-upstream

C/G


* Variation allele sequences are based on the plus strand sequence.

Nakamoto et al. BMC Genetics 2006 7:29   doi:10.1186/1471-2156-7-29

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