Table 2

Heterozygosity and Genotype mis-assigment

Strain BXD

Inbreeding Generation

Heterozygousa Intervals

Heterozygous Region (cM)

Expected % Heterozygotes

Actual % Heterozygotes (Individual)

Actual % Heterozygotes (Population)


43

13

6

37

6%

2%

3%

44

11

12

61

10%

4%

6%

45

12

13

73

8%

5%

8%

46

9

46

232

14%

15%

24%

47

13

43

226

6%

15%

24%

48

13

72

442

6%

29%

45%

49

11

8

26

10%

2%

3%

50

11

20

101

10%

7%

11%

51

12

8

44

8%

3%

5%

52

11

14

103

10%

7%

11%

57

11

10

61

10%

4%

6%

58

9

28

169

14%

11%

17%

59

10

5

31

12%

2%

3%

60

10

30

188

12%

13%

20%

61

9

33

148

14%

10%

16%

62

9

24

119

14%

8%

12%

63

8

22

123

16%

8%

12%

64

8

24

178

16%

12%

18%

65

8

69

370

16%

25%

38%

66

8

18

130

16%

9%

14%

67

9

14

116.5

14%

8%

12%

68

8

21

124

16%

8%

12%


aHeterozygosity here refers to individual heterozygosity except as specified.

Peirce et al. BMC Genetics 2004 5:7   doi:10.1186/1471-2156-5-7

Open Data