Table 8

SNPs associated with fat yielda
SNP Gene Least-squares means (SEM) Linear Dominance
0 1 2 Effect P value Q value P value Q value
rs41766835 APBB1 −0.06 (7.57) 6.22 (3.16) 12.64 (2.20) 6.39 0.0259 0.1474 0.9883 0.9719
rs110541595 ARL6IP1 3.52 (4.03) 5.83 (2.53) 12.47 (2.80) 4.88 0.0341 0.1516 0.5205 0.9719
rs43114141 AVP 3.31 (3.56) 6.03 (2.82) 12.53 (2.97) 4.76 0.0291 0.1474 0.5786 0.9719
rs133674837 BDH2 7.70 (4.15) 3.71 (2.57) 13.03 (2.74) 4.18 0.643 0.2443 0.0431 0.5703
rs137601357 CAST 18.50 (3.70) 8.56 (2.48) 4.87 (2.89) −6.38 0.0033 0.0587 0.3021 0.9719
rs109621328 CD14 −15.29 (14.91) −0.36 (4.49) 10.42 (1.94) 11.34 0.0055 0.0733 0.8097 0.9719
rs41711496 CD40 3.72 (3.20) 7.94 (2.48) 12.40 (3.17) 4.34 0.0479 0.1965 0.9705 0.9719
rs134432442 CPSF1 37.64 (6.52) 19.88 (2.79) −0.39 (2.19) −19.67 <0.0001 0.0048 0.7696 0.9719
rs133449166 CSNK1E 15.18 (3.92) 9.75 (2.57) 4.72 (2.85) −5.19 0.0216 0.1474 0.9518 0.9719
rs110629231 DNAH11 −1.91 (4.66) 7.78 (2.61) 10.96 (2.55) 5.40 0.0197 0.1474 0.3446 0.9719
rs133175991 DZIP3 −2.51 (8.81) 5.65 (3.21) 11.90 (2.36) 6.61 0.0290 0.1474 0.8583 0.9719
FGF2ag FGF2 1.05 (4.24) 7.56 (2.58) 11.43 (2.61) 4.87 0.0304 0.1474 0.6946 0.9719
rs109247499 FST 11.59 (3.27) 10.96 (2.50) 1.75 (3.25) −4.94 0.0265 0.1474 0.1831 0.8095
rs43703916 MRPL48 0.50 (3.43) 12.51 (2.48) 6.04 (3.33) 2.59 0.2581 0.3471 0.0042 0.3149
rs111027720 PARM1 5.09 (3.45) 4.84 (2.48) 18.09 (2.97) 7.01 0.0014 0.0373 0.0330 0.5651
rs136457441 RPL26 15.50 (3.55) 6.36 (2.43) 13.19 (3.35) −0.84 0.7208 0.5003 0.0136 0.3149
rs43321188 SERPINE2 −5.08 (5.73) 11.63 (2.75) 8.10 (2.27) 2.24 0.3735 0.3831 0.0118 0.3149
rs110365063 SLC18A2 −4.30 (5.73) 14.21 (2.75) 7.25 (2.27) 2.98 0.3407 0.3634 0.0366 0.5651
rs134031231 TXN2 3.94 (3.80) 13.18 (2.38) 5.89 (2.90) −0.21 0.9263 0.5256 0.0119 0.3149

aSingle nucleotide polymorphism represented as the rs number given by the National Center for Biotechnology Information database SNP. For entries not beginning with rs, the abbreviation given by previous researchers was used.

Cochran et al.

Cochran et al. BMC Genetics 2013 14:49   doi:10.1186/1471-2156-14-49

Open Data