|Accuracy of imputation using tagSNP selected for different values of rt2 on chromosome 12|
|rt2||Number of tagSNP||Number of SNP genomewide||Average distance between SNP (Mb)||Imputation accuracy ( IA )|
rt2 = Threshold of LD in statistical selection, Number of tagSNP = Number of SNP selected for a particular rt2, Number of SNP Genomewide = The equivalent number of SNP that are needed genome-wide to keep the same average inter-marker distance. Average distance between SNP (Mb) = Average distance between tagSNP selected, Imputation accuracy (IA) = Imputation accuracy of non-tagSNP. Results using simulated data.
Gualdrón Duarte et al.
Gualdrón Duarte et al. BMC Genetics 2013 14:38 doi:10.1186/1471-2156-14-38