Table 3

QTLs for plant type and earliness traits identified by QTL Network 2.1 using Pusa Dwarf / HDM04-1 F2:3 population
Trait QTL Name Marker interval Position (cM) Fvalue

PVE

(%)

Additive effect Dominance effect
PH qPH4.1 ASNP1310-ASNP2099 30.0 54.2 28.0 21.8 7.92
qPH5.1 ASSR100-ASSR206 79.3 86.8 27.5 −20.14 14.94
PB qPB4.1 ASNP1664-ASSR295 49.1 18.5 19.5 1.26 −0.03
qPB5.1 ASSR206-ASNP242 87.6 10.9 11.1 0.81 0.19
SB qSB5.1 ASSR100-ASSR206 85.3 11.0 10.4 1.64 −0.49
PD qPD3.1 ASNP64-ASNP882 10.0 9.53 3.18 7.81 −13.20
qPD4.1 ASNP2099-ASNP269 35.5 24.2 16.5 17.75 11.24
qPD5.1 ASSR100-ASSR206 85.3 31.3 18.9 15.86 −7.35
FL qFL4.1 ASNP1310-ASNP2099 34.0 84.0 51.4 14.4 5.3
qFL5.1 ASSR100-ASSR206 79.3 26.3 8.7 5.54 −2.8
MT qMT4.1 ASNP2099-ASNP269 35.5 38.0 22.6 11.72 3.10
qMT5.1 ASSR100-ASSR206 81.3 49.9 25.9 13.09 −6.28
qMT10.1 ASNP2262- ASNP2402 89.5 8.94 3.19 −4.13 −3.61

Kumawat et al.

Kumawat et al. BMC Genetics 2012 13:84   doi:10.1186/1471-2156-13-84

Open Data