Table 7

The mean, minimum and maximum of power estimates*of the test statistics for digenic, trigenic and quadrigenic disequilibria obtained for nine combinations of minor allele frequency (MAF) categories at each of the two loci (MAFAand MAFB) for all syntenic (intra-chromosome) SNP pairs over 29 chromosomes and for all non-syntenic (inter-chromosome) SNP pairs over 406 [29(29-1)/2] chromosome pairs in the Kinsella composite beef population
MAFA MAFB Intra-chromosome Inter-chromosome
<a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M55','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M55">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M56','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M56">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M57','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M57">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M58','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M58">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M59','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M59">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M60','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M60">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M61','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M61">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M62','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M62">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M63','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M63">View MathML</a> <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M64','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M64">View MathML</a>
< 0.1 Mean 0.389 0.031 0.032 0.018 0.290 0.282 0.014 0.014 0.022 0.212
< 0.1 Min 0.342 0.016 0.008 0.013 0.251 0.243 0.002 0.004 0.017 0.183
Max 0.444 0.049 0.084 0.024 0.328 0.317 0.037 0.052 0.027 0.241
0.1-0.3 Mean 0.464 0.000 0.056 0.029 0.308 0.323 0.000 0.035 0.029 0.202
Min 0.396 0.000 0.034 0.024 0.261 0.286 0.000 0.022 0.026 0.180
Max 0.544 0.002 0.104 0.036 0.364 0.361 0.000 0.058 0.034 0.225
0.3-0.5 Mean 0.477 0.000 0.187 0.051 0.136 0.323 0.000 0.183 0.041 0.094
Min 0.420 0.000 0.157 0.039 0.120 0.286 0.000 0.154 0.034 0.086
Max 0.565 0.000 0.216 0.072 0.160 0.361 0.000 0.219 0.049 0.104
< 0.1 Mean 0.463 0.053 0.000 0.030 0.310 0.320 0.034 0.000 0.030 0.204
0.1-0.3 Min 0.403 0.042 0.000 0.025 0.271 0.283 0.022 0.000 0.025 0.181
Max 0.514 0.077 0.001 0.035 0.356 0.354 0.057 0.000 0.034 0.232
0.1-0.3 Mean 0.501 0.004 0.004 0.071 0.275 0.357 0.002 0.002 0.056 0.171
Min 0.448 0.003 0.003 0.065 0.236 0.336 0.001 0.001 0.053 0.161
Max 0.544 0.006 0.008 0.085 0.318 0.377 0.003 0.003 0.059 0.188
0.3-0.5 Mean 0.505 0.003 0.201 0.090 0.127 0.363 0.002 0.194 0.062 0.086
Min 0.464 0.002 0.182 0.082 0.117 0.340 0.002 0.168 0.060 0.081
Max 0.552 0.004 0.221 0.108 0.139 0.389 0.003 0.222 0.065 0.091
< 0.1 Mean 0.476 0.188 0.000 0.051 0.137 0.326 0.182 0.000 0.042 0.095
0.3-0.5 Min 0.424 0.158 0.000 0.042 0.125 0.288 0.152 0.000 0.034 0.083
Max 0.537 0.209 0.000 0.062 0.150 0.365 0.215 0.000 0.049 0.105
0.1-0.3 Mean 0.506 0.201 0.003 0.090 0.128 0.365 0.194 0.002 0.062 0.086
Min 0.460 0.170 0.002 0.080 0.116 0.347 0.170 0.002 0.059 0.081
Max 0.548 0.223 0.005 0.101 0.140 0.388 0.221 0.004 0.065 0.092
0.3-0.5 Mean 0.512 0.200 0.199 0.095 0.101 0.373 0.193 0.193 0.063 0.067
Min 0.479 0.158 0.178 0.083 0.089 0.350 0.167 0.167 0.061 0.065
Max 0.559 0.226 0.220 0.107 0.113 0.397 0.220 0.221 0.066 0.071

* Proportion of marker pairs that X2 exceeded 3.84, the 5% critical value of <a onClick="popup('http://www.biomedcentral.com/1471-2156/13/65/mathml/M65','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2156/13/65/mathml/M65">View MathML</a>.

Jiang et al.

Jiang et al. BMC Genetics 2012 13:65   doi:10.1186/1471-2156-13-65

Open Data