Table 1

Samples genotyped in the 1000 Genomes Project pilot3 and the HapMap3 Project

Populations\Projects

1000 Genomes

HapMap3*

Both projects

Project pilot3#


European

CEU

89

165

83


ancestry

TSI

66

102

61


East Asian

CHB

109

137

89


ancestry

CHD

107

109

90


JPT

105

113

89


West African

YRI

111

203

104


ancestry

LWK

108

110

98


# The 1000 Genomes project pilot3 sequenced two trio samples from CEU and YRI. The children in these families were excluded from this analysis.

* Only samples that were in the same 7 populations of the 1000 Genomes project were listed here. The HapMap3 project also genotyped samples from ASW (African ancestry in Southwest USA), GIH (Gujarati Indians in Houston, Texas), MEX (Mexican ancestry in Los Angeles, California), and MKK (Maasai in Kinyawa, Kenya).

Zhang et al. BMC Genetics 2012 13:6   doi:10.1186/1471-2156-13-6

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