Open Access Research article

An Expressed Sequence Tag (EST)-enriched genetic map of turbot (Scophthalmus maximus): a useful framework for comparative genomics across model and farmed teleosts

Carmen Bouza1, Miguel Hermida1, Belén G Pardo1, Manuel Vera1, Carlos Fernández1, Roberto de la Herrán2, Rafael Navajas-Pérez2, José Antonio Álvarez-Dios3, Antonio Gómez-Tato4 and Paulino Martínez1*

Author Affiliations

1 Departamento de Genética, Facultade de Veterinaria, Universidade de Santiago de Compostela (USC), Campus de Lugo, 27002, Lugo, Spain

2 Departamento de Genética, Facultad de Ciencias, Universidad de Granada, 18071, Granada, Spain

3 Departamento de Matemática Aplicada, (USC), Facultade de Matemáticas, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain

4 Departamento de Geometría y Topología, Facultad de Matemáticas, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain

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BMC Genetics 2012, 13:54  doi:10.1186/1471-2156-13-54

Published: 2 July 2012

Additional files

Additional file 1:

Table S1. Characteristics of the genetic markers included in the turbot map.

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Additional file 2:

Table S2. Informative markers used to construct the turbot consensus map.

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Additional file 3:

Figure S1. Correspondence between the nine family maps used to construct the turbot consensus map.

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Additional file 4:

Table S3. Number of markers and map length for each linkage group (LG) of turbot.

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Additional file 5:

Figure S2. Consensus, female and male genetic maps of turbot.

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Additional file 6:

Figure S3. Comparative mapping between the turbot map and the five model teleost genomes.

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Additional file 7:

Figure S4. Oxford grid showing syntenies between the turbot linkage map and the zebrafish genome.

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Additional file 8:

Table S4. Putative syntenic markers (210) between the turbot genetic map and the stickleback genome.

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Additional file 9:

Table S5. Putative syntenic markers (60) between the turbot genetic map and four model Acanthopterygii genomes.

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Additional file 10:

Table S6. Conservation of multiple similarity hits between the turbot and four model Acanthopterygii genomes.

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