|Linear mixed model analysis of the rumen position experiment|
|Source of variation||DPI_rumen||JGI_rumen|
|Host Animal||1.22% ***||9.00% ***|
|Sampling Position||0.07% ***||0.48% ***|
A linear mixed model (Yijk = μ + positioni + contigj + animalk + eijk) was fitted to the read using ASReml  count data, where Y = logn transformed counts, position = the position within the rumen that the sample was from, animal = the host animal that samples were taken from. *** p < 0.00001.
Ross et al.
Ross et al. BMC Genetics 2012 13:53 doi:10.1186/1471-2156-13-53