Table 1

Marker polymorphisms used for mapping, and distribution of the different markers according to the cross type (D1, D2 and C)
Marker type AFLP EST-SSR scIvana_1 Total
Number of scorable bands (evaluated in total)a 3,094 273 357 3,724
Number of segregating markers (genotyped) 685 220 87 992
Number of polymorphic markers between parents 488 151 74 713
Number of monomorphic markers between parents 197 69 13 279
Number of single dose markers (SDMs)b 535 130 65 730
SDMs of origin from ‘IAC66-6′ [D1]c 197 41 23 261
SDMs of origin from ‘TUC71-7′ [D2]c 192 60 32 284
SDMs of origin from both parents [C]d 146 29 10 185
Total number of linked markers on the map 395 95 56 546
Number of linked markers of origin from ‘IAC66-6′ [D1] 154 33 21 208
Number of linked markers of origin from ‘TUC71-7′ [D2] 164 46 30 240
Number of linked markers of origin from both parents [C] 77 16 5 98

a AFLPs generated from 22 enzyme-selective primer combinations, EST-SSR alleles generated from 41 loci and scIvana_1-based markers generated from 6 restriction enzyme-primer combinations.

b Data obtained after Bonferroni’s correction.

c Markers present in only one parent with a 1:1 segregation ratio in the mapping population.

d Markers present in both parents with a 3:1 segregation ratio in the mapping population.

Palhares et al.

Palhares et al. BMC Genetics 2012 13:51   doi:10.1186/1471-2156-13-51

Open Data