Table 3

Block structure per chromosome
Chromosome Number of blocks Total block length (Kb) % of Chromosome length in blocks Min. block length (Kb) Max. block length (Kb) Number of SNPs in blocks % of SNPs in blocks
1 257 5,440.86 1.97 1.74 265.59 569 11.41
2 252 11,148.79 4.46 3.92 1,262.79 634 13.56
3 200 5,321.47 2.38 2.79 385.36 464 11.14
4 103 3,273.46 2.76 2.89 228.94 244 10.86
5 86 2,023.86 1.88 0.07 325.55 191 9.66
6 115 2,705.20 2.31 3.72 225.92 257 11.74
7 95 1,753.56 1.75 4.06 158.77 204 10.81
8 88 2,256.32 2.49 2.62 262.30 198 11.53
9 109 2,886.37 3.04 3.66 472.64 249 13.56
10 79 5,231.93 6.26 2.46 1,075.88 210 13.79
11 41 779.45 1.25 5.76 177.74 88 9.14
12 80 1,154.64 1.46 1.95 182.06 165 11.33
13 71 1,725.72 2.08 3.75 175.94 161 11.48
14 34 648.62 1.04 0.04 120.50 76 7.92
15 62 1,716.25 2.12 2.13 248.80 140 10.19
16 52 980.30 1.37 2.46 134.49 113 8.61
17 42 1,225.16 1.69 2.99 231.71 103 8.74
18 50 854.06 1.25 5.08 152.75 107 8.98
19 51 978.44 1.61 5.73 316.69 105 10.17
20 33 660.86 1.31 6.33 155.29 72 7.91
21 34 521.40 1.08 2.84 116.56 73 10.08
22 48 870.01 1.72 2.63 200.82 104 11.04
23 39 1,009.87 1.61 6.71 328.76 85 9.10
24 19 453.21 1.09 4.38 233.82 40 6.69
25 37 738.85 1.68 6.76 205.07 82 9.69
26 22 366.91 0.83 0.92 128.69 46 6.07
All 2,099 56,725.56 2.32 0.04 1,262.79 4,780 10.92

The number of blocks, total, minimum and maximum block length, percentage of the sequence covered by blocks, number and percentage of SNPs in blocks on a per chromosome basis are reported in this table. Values obtained across the genome are also shown.

García-Gámez et al.

García-Gámez et al. BMC Genetics 2012 13:43   doi:10.1186/1471-2156-13-43

Open Data