Table 6

Power, RMSE of the QTL location and proportion of estimated QTL locations at marker locations according to the true QTL location under H1

QTL location (M)


α1

0

0.05

0.1

0.15

0.2


Power2 (%)

0.05

96.1

92.3

87.2

82.0

81.2

0.01

87.4

80.1

69.7

61.9

60.2


RMSE3 (cM)

-

7.5

7.6

9.5

10.7

11.2

0.05

7.2

7.2

9.0

10.1

10.7

0.01

7.0

7.0

8.6

9.7

10.3


Proportion4 (%)

-

51.5

38.6

26.6

19.0

16.2

0.05

51.3

37.8

24.8

15.8

13.6

0.01

50.9

37.2

24.3

13.8

11.2


1Significance level for the LRT.

2Power of the QTL detection for significance level α.

3RMSE of the estimated QTL location in a population of 300 progeny with a true QTL located at 0.1 M on a 0.4 M linkage group.

4Proportion of QTL located at a marker location (2 markers located at 0 M and 0.4 M).

Wang et al. BMC Genetics 2012 13:29   doi:10.1186/1471-2156-13-29

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