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Open Access Research article

Empirical evaluations of analytical issues arising from predicting HLA alleles using multiple SNPs

Xinyi Cindy Zhang1, Shuying Sue Li1, Hongwei Wang1, John A Hansen23 and Lue Ping Zhao1*

Author Affiliations

1 Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave N, Seattle, WA 98109, USA

2 Division of Clinical Research, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave N, Seattle, WA 98109, USA

3 School of Medicine, University of Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA

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BMC Genetics 2011, 12:39  doi:10.1186/1471-2156-12-39

Published: 25 April 2011

Additional files

Additional file 1:

Supplemental data. Detailed results of HLA alleles in the three study cohorts, prediction accuracies and the list of selected SNPs in the final HLA predictive models.

Format: DOCX Size: 97KB Download file

Open Data