Figure 3.

The Negative Logarithm to Base 10 of p Values under the Alternative Hypothesis as a Function of Minor Allele Frequencies (MAFs, ρ) and Odds Ratios (ORs, exp (β)) given a Fixed Sample Size n = 2000. The negative logarithm to base 10 of p values is corresponding to the expected test statistics in Figure 2 under the alternative hypothesis. We observed that, when MAF = 0.4 and OR = 1.5, -log10 of p value = 4.5044; when MAF = 0.1 and OR = 1.8, -log10 of p value = 2.1312.

Wang and Shete BMC Genetics 2011 12:3   doi:10.1186/1471-2156-12-3
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