Table 2

Marker pairs with redundancy for a locus

Redundant marker

GenBank accession

UniSTS ID

Cita

Mapped marker

LG

Evidenceb


estPtIFG_0066_a

H75018

n/a

[13]

PtIFG_66_1

2

B

estPtIFG_0606_a

n/a

n/a

[13]

PtIFG_606_1

6

B

estPtIFG_1165_a

H75179

n/a

[13]

estPtIFG_1950_a

6

A

estPtIFG_1635_a

H75110

n/a

[13]

PtIFG_1635_A

10

B

estPtIFG_2009_a

n/a

n/a

[13]

PtIFG_2009_A

6

B

estPtIFG_2253_a

H75063

n/a

[13]

PtIFG_2253_A

1

B

estPtIFG_2610E(S)

H75220

n/a

[13]

estPtIFG_1950_a

6

A

estPtIFG_8496_a

AA739536

516058

[14]

estPtIFG_9198_a

1

A

estPtIFG_8596_a

AA739594

516051

[14]

estPtIFG_9092_a

5

A

estPtIFG_8843_a

AA739759

516049

[12]

estPtIFG_9053_a

1

A

estPtIFG_8907_a

AA739797

516254

[13]

PtSIFG_0219

8

A

estPtIFG_AGP-3

n/a

n/a

[12]

SsrPt_ctg7444

9

C

estPtNCS_20G2_a

AI812850

n/a

[12]

estPtIFG_9053_a

1

A

estPtNCS_6C12F_a

AA556811

516381

[14]

PpSIFG_3145

3

C

PtIFG_1576_1

n/a

n/a

[11]

estPtIFG_1576_a

1

B

PtIFG_1635_C

H75110

n/a

[11]

PtIFG_1635_A

10

B

PtIFG_1A2_1

n/a

n/a

[11]

PtIFG_1A2_C

4

B

PtIFG_2145_5

H75056

n/a

[18]

PtIFG_2145_76

3

B

PtIFG_2146_31

n/a

n/a

[11]

PtIFG_2146_2

2

B

PtIFG_2540_2

H75131

n/a

[11]

estPtIFG_0893_a

5

A

PtIFG_2610_A

H75221

n/a

[11]

estPtIFG_1950_a

6

A

PtIFG_2889_21

H75234

n/a

[11]

estPtIFG_2889_a

3

B

PtIFG_2931_b

H75250

n/a

[11]

PtIFG_2931_A

1

B

PtTX3118

AF277845

508481

[40]

PtSIFG_1325

2

C

SsrPt_AA739797

AA739797

516382

[27]

PtSIFG_0219

8

A

SsrPt_ctg4487a

DR159792

n/a

[27]

SsrPt_ctg7141

3

A

SsrPt_ctg4487b

DR159792

516389

[27]

SsrPt_ctg7141

3

A

SsrPt_ctg4698

BG275886

516390

[27]

PtSIFG_1325

2

A


n/a = not available.

a The citation in which the redundant marker was first reported. Additional file 2 lists the citations, GenBank accession numbers, and UniSTS IDs of the mapped markers.

b Evidence for assignment of redundant status: all markers mapped within 3 cM of each other, "A" denotes marker pairs assigned to the same UniGene, "B" denotes marker pairs derived from the same DNA clone, "C" denotes marker pair sequences with a BLASTn E-value less than 4 × 10-43.

Echt et al. BMC Genetics 2011 12:17   doi:10.1186/1471-2156-12-17

Open Data