Table 5

SNP associations with body conformation traits and growth-related traits

SNP

Gene/BTA

Allele substitution

Body depth1

Rump angle1

Rump width1

Stature1


rs42940189

CALCR/BTA4

A→G

-0.240

(0.140)

0.136

(0.149)

0.062

(0.157)

-0.169

(0.151)

rs42940187

CALCR/BTA4

C→T

0.161

(0.116)

-0.050

(0.125)

-0.151

(0.130)

0.169

(0.124)

GRB10_p.A5394141C

GRB10/BTA4

A→C

0.166

(0.193)

0.191

(0.198)

0.352

(0.206)

0.371

(0.200)

rs43375833

GRB10/BTA4

C→T

-0.001

(0.088)

-0.239*

(0.093)

0.067

(0.097)

-0.033

(0.094)

rs42575466

ZNF215/BTA15

A→G

0.280

(0.195)

0.075

(0.200)

0.173

(0.206)

0.479*

(0.202)

rs42575474

ZNF215/BTA15

A→G

0.245**

(0.086)

-0.018

(0.091)

0.293**

(0.093)

0.302**

(0.092)

PEG3_p.A64370595G

PEG3/BTA18

A→G

-0.106

(0.083)

0.109

(0.087)

-0.156

(0.092)

-0.082

(0.088)

PEG3_p.C64367437T

PEG3/BTA18

C→T

0.152

(0.081)

-0.053

(0.086)

0.140

(0.090)

0.111

(0.087)

rs17871322

PEG3/BTA18

A→G

-0.180*

(0.083)

0.068

(0.088)

-0.168

(0.092)

-0.212*

(0.088)

rs41899915

ZIM2/BTA18

C→G

-0.101

(0.096)

0.119

(0.101)

-0.046

(0.105)

-0.113

(0.102)

rs41899913

ZIM2/BTA18

C→G

0.183

(0.101)

-0.114

(0.107)

0.154

(0.112)

0.250*

(0.108)

rs41899911

ZIM2/BTA18

C→T

-0.084

(0.096)

0.107

(0.101)

-0.031

(0.106)

-0.088

(0.103)

rs41899910

ZIM2/BTA18

C→T

0.123

(0.087)

-0.148

(0.091)

0.048

(0.095)

0.120

(0.093)

RASGRF1_p.C25039690T

RASGRF1/BTA21

A→G

-0.066

(0.076)

0.012

(0.0801

-0.075

(0.084)

-0.096

(0.081)

rs42194502

PHLDA2/BTA29

A→T

-0.131

(0.122)

0.210

(0.128)

-0.081

(0.135)

0.001

(0.130)

rs42637579

TSPAN32/BTA29

A→G

0.027

(0.082)

-0.008

(0.085)

0.044

(0.089)

0.075

(0.087)

rs42637578

TSPAN32/BTA29

C→T

0.062

(0.156)

0.124

(0.161)

-0.150

(0.170)

0.079

(0.165)


Standard errors for each trait are shown in parentheses. Levels of significance: P ≤ 0.10; *P ≤ 0.05; **P ≤ 0.01. 1 Expressed in genetic standard deviations.

Magee et al. BMC Genetics 2010 11:93   doi:10.1186/1471-2156-11-93

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