Table 8

UNPHASED output

Haplotype

Case

Control

P-value


2-2-1-2-1-1

6.115

6.69

0.2675

2-2-1-2-1-2

0.9372

0

0.308

2-2-1-2-3-1

0.6905

0

0.9992

2-2-1-4-1-1

828.9

834

0.8783

2-2-1-4-1-2

9.433

10.21

0.8322

2-2-1-4-3-1

57.67

113

3.747E-05

2-2-1-4-3-2

1.007

0

0.3188

2-2-3-2-1-1

12.98

6.27

0.3267

2-2-3-2-1-2

0

0.6707

1

2-2-3-2-3-1

1.204

0

1

2-2-3-4-1-1

0.867

1.918

0.3793

2-2-3-4-1-2

15.44

19.16

0.7131

2-2-3-4-3-1

30.39

43.74

0.2237

2-2-3-4-3-2

2.114

0.9249

0.609

2-4-1-4-1-1

1.627

3.416

0.365

2-4-3-2-1-2

0.8596

2.21

0.6195

2-4-3-4-1-1

1.591

13.85

0.002506

2-4-3-4-1-2

137.2

122.5

0.4528

2-4-3-4-3-1

0

2.456

0.01213

3-2-1-2-1-1

1.148

0.6285

0.7064

3-2-1-4-1-1

85.07

64.9

0.07011

3-2-1-4-1-2

1.305

0.2028

0.3483

3-2-1-4-3-1

3.732

0

0.3045

3-2-3-2-1-1

295.5

334.6

0.1975

3-2-3-2-1-2

7.775

4.195

0.2888

3-2-3-2-3-1

4.929

8.097

0.1492

3-2-3-4-1-1

5.902

0.8962

0.06286

3-2-3-4-1-2

48.69

19.48

0.0004034

3-2-3-4-3-1

1114

1153

0.3141

3-2-3-4-3-2

5.975

2.85

0.2993

3-4-1-4-1-1

1.055

4.961

0.1278

3-4-1-4-1-2

1.301

2.3

0.6549

3-4-1-4-3-1

1.013

0

0.3212

3-4-1-4-3-2

0

0.6906

0.09517

3-4-3-2-1-1

7.049

1.218

0.3176

3-4-3-2-1-2

12.86

31.44

0.008042

3-4-3-4-1-1

17.34

20.11

0.555

3-4-3-4-1-2

2422

2309

0.02225

3-4-3-4-3-1

0

12.7

0.004522


UNPHASED output for window beginning with SNP rs17046067.

Wason and Dudbridge BMC Genetics 2010 11:80   doi:10.1186/1471-2156-11-80

Open Data