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Open Access Research article

Influence of mutation rate on estimators of genetic differentiation - lessons from Arabidopsis thaliana

Ilkka Kronholm1, Olivier Loudet2 and Juliette de Meaux1*

Author Affiliations

1 Department of Plant Breeding and Genetics, Max-Planck Institute for Plant Breeding Research, Carl-von-Linné-Weg 10, 50829 Cologne, Germany

2 Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech, F-78000 Versailles, France

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BMC Genetics 2010, 11:33  doi:10.1186/1471-2156-11-33

Published: 1 May 2010

Additional files

Additional file 1:

Population information. An Excel file with supplementary tables for information on sampled populations. details about microsatellite and SNP loci and genotyping

Format: XLS Size: 29KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

Microsatellite genotyping. An Excel file with the microsatellite genotyping information and primer sequences.

Format: XLS Size: 26KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 3:

SNP positions. An Excel file with the genomic positions of the SNPs used in this study.

Format: XLS Size: 23KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 4:

Genotypic data. An Excel file with the microsatellite and SNP genotypes of the lines used in this study.

Format: XLS Size: 624KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 5:

Computer simulations with selfing. A PDF file with a supplementary figure for results of computer simulations when the rate of self-fertilisation is set to 0.9.

Format: PDF Size: 176KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 6:

Computer simulations for QST with selfing. A PDF file with a supplementary figure for results of computer simulations for QST when rate of self-fertilisation is set to 0.9.

Format: PDF Size: 68KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 7:

SNP ascertainment bias. A PDF file with supplementary figure for SNP ascertainment bias in the four different geographic regions and the Nordborg dataset.

Format: PDF Size: 161KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data