Table 2 |
||||||||||
|
Observed and expected heterozygosities of the rSNPs in crossbred animals and Angus, Charolais and Limousin breeds |
||||||||||
|
SNP |
SNP position relative to TSS |
Alternate alleles (1/2) |
Crossbred animals (n = 141) |
ANG (n = 15) |
CHAR (n = 15) |
LIM (n = 15) |
||||
|
|
||||||||||
|
HO |
HE |
HO |
HE |
HO |
HE |
HO |
HE |
|||
|
SNP1 |
-24 |
C/T |
0.39 |
0.37 |
0.2 |
0.18 |
0.333 |
0.358 |
0.47 |
0.42 |
|
SNP2 |
-307 |
C/T |
0.489 |
0.492 |
0.533 |
0.48 |
0.333 |
0.491 |
0.6 |
0.5 |
|
SNP3 |
-672 |
A/G |
0.355 |
0.351 |
0.2 |
0.18 |
0.333 |
0.358 |
0.4 |
0.444 |
|
SNP4 |
-687 |
C/G |
0.213 |
0.243 |
0.2 |
0.18 |
0.2 |
0.278 |
0.07 |
0.064 |
|
SNP5 |
-733 |
C/T |
0.397 |
0.366 |
0.2 |
0.18 |
0.333 |
0.358 |
0.47 |
0.42 |
|
SNP6 |
-944 |
C/T |
0.163 |
0.15 |
0 |
0 |
0.133 |
0.124 |
0 |
0 |
|
SNP7 |
-961 |
A/C |
0.028 |
0.028 |
0 |
0 |
0.333 |
0.278 |
0.53 |
0.391 |
|
|
||||||||||
|
ANG: Aberdeen Angus, CHAR: Charolais, LIM: Limousin HO: Observed heterozygosity, HE: Expected heterozygosity |
||||||||||
|
Aslan et al. BMC Genetics 2010 11:111 doi:10.1186/1471-2156-11-111 |
||||||||||
