Additional file 5.

Figure S5. We classified the cis eQTLs detected using the Ilmn650Y set into two categories: (1) QTL whose best hit was closest to the transcription start site (TSS) of the gene relative to the transcriptional end site (TES; panel A); and (2) QTL whose best hit was closest to the TES relative to the TSS (panel B). Clearly, the SNPs that strongly associated with mRNA expression levels were clustered around the TSS and TES regions of the genes.

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Hao et al. BMC Genetics 2009 10:27   doi:10.1186/1471-2156-10-27