Table 1

Genomic features of the vibrios genomes.

Organism

Accession no.

Genome size (nt)

G+C (mol%)

No. of CDS

%

coding region

Nc*


Aliivibrio salmonicida FLI1238

FM178379

3325164

39

77

48

Chromosome I

FM178380

1206461

38

2820

77

Chromosome II

984

Photobacterium profundum SS9

Chromosome I

CR354531

4085304

41

3416

82

51

Chromosome II

CR354532

2237943

41

2006

80

Vibrio alginolyticus 40B

ACZB00000000

5234286

45

4341

81

53

Vibrio alginolyticus 12G01

AAPS00000000

5160431

44

4732

86

53

Vibrio angustum S14+

AAOJ00000000

5101447

39

4558

84

48

Vibrio campbellii AND4

ABGR00000000

4255798

44

3935

85

53

Vibrio cholerae N16961

AE003852

2961149

47

87

52

Chromosome I

AE003853

1072315

46

2742

84

Chromosome II

1093

Vibrio cholerae 0395

CP000627

3024069

47

88

52

Chromosome I

CP000626

1108250

46

2742

86

Chromosome II

1133

Vibrio cholerae 1587

AAUR00000000

4137501

47

3758

82

52

Vibrio cholerae 2740-80

AAUT00000000

3945478

47

3771

87

52

Vibrio cholerae 623-39

AAWG00000000

3975259

47

3777

86

52

Vibrio cholerae B33

AAWE00000000

4026835

47

3677

83

53

Vibrio cholerae MAK757

AAUS00000000

3917446

47

3501

82

52

Vibrio cholerae MZO-2

AAWF00000000

3862985

47

3425

83

52

Vibrio cholerae MZO-3

AAUU00000000

4146039

47

3897

86

52

Vibrio cholerae NCTC8457

AAWD00000000

4063388

47

3975

86

53

Vibrio cholerae V52

AAKJ00000000

3974495

47

3815

86

52

Vibrio fischeri ES114+

CP000020

2897536

38

45

Chromosome I

CP000021

1330333

37

2586

86

Chromosome II

1175

87

Vibrio fischeri MJ11+

45

Chromosome I

CP001139

2905029

38

2590

86

Chromosome II

CP001133

1418848

37

1254

87

Vibrio harveyi-like 1AD3

ACZC00000000

5989646

46

4954

66

51

Vibrio harveyi ATCC BAA-1116

CP000789

3765351

45

85

53

Chromosome I

CP000790

2204018

45

3546

86

Chromosome II

2374

Vibrio harveyi HY01

AAWP00000000

5400985

45

4327

75

51

Vibrio mimicus VM573

ACYV00000000

4373300

46

3744

86

53

Vibrio mimicus VM603

ACYU00000000

4421792

46

3790

86

53

Vibrio parahaemolyticus RIMD2210633

Chromosome I

BA000031

3288558

45

3080

86

52

Chromosome II

BA000032

1877212

45

1752

86

Vibrio parahaemolyticus AQ3810

AAWQ00000000

5771228

45

5509

80

53

Vibrio shilonii AK1

ABCH00000000

5701826

43

5360

88

54

Vibrio sp Ex25

AAKK00000000

4844262

44

4240

84

53

Vibrio sp MED222

AAND00000000

4891901

43

4590

85

52

Vibrio splendidus 12B01

AAMR00000000

5596386

44

5231

85

53

Vibrio vulnificus CMCP6

Chromosome I

AE016795

3281944

46

2915

83

53

Chromosome II

AE016796

1844853

47

1557

86

Vibrio vulnificus YJ016

BA000037

3354505

46

87

53

Chromosome I

BA000038

1857073

47

3259

89

Chromosome II

1696


The genomes sequenced by this study are in bold. +Vibrio angustum and Vibrio fischeri were reclassified as Photobacterium angustum [67] and Aliivibrio fischeri [35], respectively. *calculated using concatenated chromosome sequences.

Thompson et al. BMC Evolutionary Biology 2009 9:258   doi:10.1186/1471-2148-9-258

Open Data