Table 2 |
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|
Taxonomic distributions of the C +/- ribosomal proteins |
||||||||
|
L32 |
L36 |
L31 |
S14 |
L33 |
S18 |
L28 |
S4 |
|
|
|
||||||||
|
Verrucomicrobiae |
- |
- |
- |
- |
- |
- |
- |
- |
|
α-proteobacteria |
+,- |
- |
- |
- |
- |
- |
- |
- |
|
Bacteroidetes |
+,- |
- |
- |
- |
- |
- |
- |
- |
|
Chlamydiae |
+ |
- |
- |
- |
- |
- |
- |
- |
|
Fusobacteria |
+ |
nd |
- |
- |
- |
- |
- |
- |
|
β-proteobacteria |
- |
+,+/- |
+,-,+/- |
- |
- |
- |
- |
+,- |
|
γ-proteobacteria |
- |
+,-,+/- |
+,-,+/- |
- |
- |
- |
- |
- |
|
Chlorobi |
+ |
+ |
+ |
- |
- |
- |
- |
- |
|
Planctomycetes |
nd |
- |
+ |
+ |
- |
- |
- |
-,+/- |
|
Deinococcus |
+ |
+ |
- |
+, - |
- |
- |
-,+/- |
- |
|
Cyanobacteria |
- |
+,- |
+,- |
+,- |
+,- |
- |
- |
+,- |
|
Bacilli |
+,- |
+ |
-,+/- |
+,-,+/- |
-,+/- |
- |
- |
- |
|
Tenericutes (Mollicutes) |
+,- |
+,- |
+ |
+,- |
+ |
+,- |
- |
- |
|
ε-proteobacteria |
- |
+ |
+,- |
+ |
+,- |
+,- |
- |
- |
|
Actinobacteria |
+,- |
+ |
+,-,+/- |
+,-,+/- |
+,-,+/- |
+,-,+/- |
+,-,+/- |
+,- |
|
Chloroflexi |
+ |
+ |
+,- |
+ |
+,- |
+,-,+/- |
+,-,+/- |
+,- |
|
Spirochaetes |
+ |
+ |
+,- |
+ |
- |
+,- |
+,- |
+,- |
|
Thermus |
+ |
+ |
+ |
+ |
+ |
- |
- |
+ |
|
Magnetococcus |
+ |
+ |
+ |
+ |
+ |
+ |
- |
+ |
|
Aquificae |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
- |
|
δ-proteobacteria |
+ |
+ |
+ |
+ |
+,- |
+ |
+ |
+ |
|
Clostridia |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+,+/- |
|
Acidobacteria |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
Thermotogae |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
|
||||||||
|
The complete data set is given as Additional File 1. +,- indicates each form comprises at least 10% of the group, but occurs only once in each genome. +/- indicates at least 10% of the genomes in the group contain both forms. This cut-off removes all minor cases of HGT. nd indicates that the r-protein was not detected. |
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|
Chen et al. BMC Evolutionary Biology 2009 9:179 doi:10.1186/1471-2148-9-179 |
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