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The variation of amino acids caused by the nucleotide changes in genes. The SNPs were detected by primers at the position with bold numbers in the Site column. |
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| Number |
Site |
Substitution |
Amino acid position |
Amino acid variation |
Numbers of gene sample |
|
|
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| 1 |
5 |
T-G-A |
Signal peptide |
Leu-Arg-His |
241-1-2 |
| 2 |
19 |
G-A |
Signal peptide |
Val-Asp |
59–185 |
| 3 |
25 |
G-T |
Signal peptide |
Ala-Ser |
154-90 |
| 4 |
28 |
A-G-C |
Signal peptide |
Lys-Glu-Gln |
59-170-15 |
| 5 |
31 |
T-C |
Signal peptide |
Tyr-His |
242-2 |
| 6 |
34/35 |
G/A-A/A-G/G-A/G |
Signal peptide |
Asp-Asn-Gly-Ser |
139-11-91-3 |
| 7 |
46/47 |
G/A-G/T-A/T-T/A-G/G |
Signal peptide |
Asp-Val-Ile-Tyr-Gly |
57-74-7-91-15 |
| 8 |
79/81 |
T/T-C/G |
10 |
Tyr-Gln |
129-115 |
| 9 |
88/89 |
C/A-A/A-C/G |
13 |
Gln-Lys-Arg |
174-68-2 |
| 10 |
107 |
G-A-C |
19 |
Gly-Asp-Ala |
224-2-18 |
| 11 |
118 |
C-G-T |
23 |
Leu-Val-Leu |
62-66-116 |
| 12 |
125 |
A-G |
25 |
Lys-Arg |
219-25 |
| 13 |
127 |
C-G |
26 |
Leu-Val |
242-2 |
| 14 |
163 |
C-G |
38 |
Leu-Val |
180-64 |
| 15 |
190 |
A-G-C |
47 |
Tyr-Asp-His |
66-173-5 |
| 16 |
196 |
A-G |
49 |
Ser-Gly |
242-2 |
| 17 |
211 |
T-C |
54 |
Cys-Arg |
242-2 |
| 18 |
215/216 |
A/T-G/T-A/G-G/G |
55 |
Asp-Gly-Glu-Gly |
66-166-1-11 |
| 19 |
217 |
G-A |
56 |
Ala-Thr |
242-2 |
| 20 |
227 |
A-G |
59 |
Asn-Ser |
68–176 |
| 21 |
238/239 |
A/G-A/A-G/A |
63 |
Ser-Asn-Asp |
222-16-6 |
| 22 |
251 |
A-G |
67 |
Glu-Gly |
242-2 |
| 23 |
259/260 |
G/C-G/T-A/T |
70 |
Ala-Val-Met |
80-151-13 |
| 24 |
262/263 |
C/A-T/C-T/A |
71 |
Gln-Ser-* |
156-81-7 |
| 25 |
287 |
C-A |
79 |
Ala-Glu |
225-19 |
| 26 |
295 |
C-A |
82 |
Thr-Lys |
93–151 |
| 27 |
314 |
T-C |
88 |
Val-Ala |
241-3 |
| 28 |
320 |
T-C |
90 |
Leu-Pro |
242-2 |
| 29 |
343 |
G-A |
98 |
Val-Ile |
236-8 |
| 30 |
350 |
A-G |
100 |
Lys-Arg |
128-115 |
| 31 |
364 |
A-G |
105 |
Ile-Val |
129-114 |
| 32 |
380 |
G-A |
110 |
Gly-Asp |
72–172 |
| 33 |
382 |
A-G |
111 |
Arg-Gly |
70–174 |
| 34 |
391 |
A-G |
114 |
Ile-Val |
70–174 |
| 35 |
394 |
T-C |
115 |
Cys-Arg |
242-2 |
| 36 |
401 |
A-G-T |
117 |
Asp-Gly-Val |
183-60-1 |
| 37 |
409 |
A-G |
120 |
Thr-Ala |
68–176 |
| 38 |
416 |
G-A-C |
122 |
Arg-Gln-Pro |
68-15-161 |
Wang et al. BMC Evolutionary Biology 2008 8:91 doi:10.1186/1471-2148-8-91 |
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