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Go categories and relative divergence rates (dN/dS) in hominid and murid lineages |
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| Go categories within "biological process" |
dN/dS (ω) hominid |
dN/dS (ω) murid |
p-value |
|
|
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| GO: Organelle organization and biogenesis |
0.093797 |
0.136622 |
0.34 |
| GO: Carbohydrate metabolism |
0.094282 |
0.061524 |
0.17 |
| GO: Energy pathways |
0.095999 |
0.06409 |
0.25 |
| GO: Protein transport |
0.1000621 |
0.056915 |
0.10 |
| GO: Cell organization and biogenesis |
0.102521 |
0.11164 |
0.75 |
| GO: Cytoskeleton organization and biogenesis |
0.106537 |
0.123027 |
0.68 |
| GO: Protein biosynthesis |
0.10841 |
0.076408 |
0.092 |
| GO: Transcription |
0.1093033 |
0.085371 |
0.49 |
| GO: Cell growth and/or maintenance |
0.112558 |
0.078195 |
0.02 |
| GO: Cytoplasm organization and biogenesis |
0.115938 |
0.124335 |
0.80 |
| GO: Catabolism |
0.117659 |
0.107771 |
0.70 |
| GO: Transport |
0.118198 |
0.076005 |
0.059 |
| GO: Amino acid and derivative metabolism |
0.118466 |
0.105378 |
0.64 |
| GO: Protein metabolism |
0.118917 |
0.09077 |
0.06 |
| GO: Biosynthesis |
0.120925 |
0.09066 |
0.054 |
| GO: Physiological process |
0.12305 |
0.08881 |
0.0001 |
| GO: Cell proliferation |
0.125543 |
0.055601 |
0.03 |
| GO: Metabolism |
0.12623 |
0.0897 |
0.0001 |
| GO: Nucleobase et al*. |
0.128449 |
0.07981 |
0.01 |
| GO: Cell cycle |
0.137136 |
0.055177 |
0.01 |
| GO: Response to stress |
0.140927 |
0.064359 |
0.03 |
| GO: DNA metabolism |
0.154415 |
0.062976 |
0.0028 |
| GO: Protein modification |
0.170329 |
0.116675 |
0.21 |
| GO: Lipid metabolism |
0.171853 |
0.124668 |
0.17 |
| GO: Biological_process unknown |
0.2353 |
0.17011 |
0.001 |
| GO: Cell communication |
0.2439164 |
0.159463 |
0.17 |
|
*Nucleobase, nucleoside, nucleotide and nucleic acid metabolism. Only those categories of biological processes with at least 5 genes in both lineages are listed. The p-value of the test comparing the average dN/dS (ω) ratio between hominid and murid lineages is given for each category (p-value). None of the category showed an accelerated evolution in hominid or rodent, given the average genome difference between lineages. | |||
Prugnolle et al. BMC Evolutionary Biology 2008 8:223 doi:10.1186/1471-2148-8-223 |
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