Table 5

Age estimates of R0 subclades.

Hg

N

τ

T ± ΔT (kya) (CR)a

ρb (CR)

T ± ΔT (kya) (CR)c

ρb (HVS-I)

T ± ΔT (kya) (HVS-I)c

T ± ΔT (kya) (HVS-I)d

T ± ΔT (kya) (Coding Region)e


H

346

3.3

18.7 ± 2.4

1.19

11.0 ± 1.5

0.86

17.4 ± 4.1

n.d.f

18.4 ± 2.0

H1 (w/o H1a)

295

2.6

13.0 ± 0.9

1.29

12.0 ± 2.6

0.56

12.0 ± 3.2

15.2 ± 5.1

12.8 ± 2.4

H1a

40

3.3

18.7 ± 2.4

2.03

18.7 ± 6.7

n.d.

n.d.

6.4 ± 3.6

n.d.

H10

44

2.3

13.1 ± 5.8

0.75

6.9 ± 3.0

0.59

11.9 ± 5.9

n.d.

n.d.

H11

35

1.9

10.8 ± 7.3

1.57

14.5 ± 4.1

1.03

20.7 ± 7.8

43.9 ± 18.5

n.d.

H13a1

37

1.9

10.8 ± 1.9

0.85

8.0 ± 3.0

0.49

9.8 ± 5.7

n.d.

n.d.

H14

18

4.5

25.6 ± 5.4

2.24

20.7 ± 8.3

1.18

23.7 ± 8.6

n.d.

n.d.

H15

20

1.8

10.2 ± 3.4

1.10

10.2 ± 4.1

0.10

2.0 ± 1.4

n.d.

n.d.

H16

18

2.8

16.0 ± 6.6

0.55

5.1 ± 2.4

0.39

7.9 ± 4.9

n.d.

n.d.

H2a

61

3.4

19.3 ± 2.0

1.89

17.4 ± 7.1

0.69

13.9 ± 8.0

12.3 ± 4.6

n.d.

H3

76

1.8

10.2 ± 5.0

1.11

10.2 ± 2.8

0.76

15.4 ± 6.0

16.0 ± 8.1

10.3 ± 2.4

H4

33

1.7

9.7 ± 3.0

0.79

7.3 ± 3.5

0.18

3.7 ± 2.1

11.5 ± 5.4

n.d.

H5

124

2.4

13.6 ± 1.2

0.98

9.0 ± 1.7

0.66

13.3 ± 3.3

12.6 ± 4.4

n.d.

H6

42

1.7

9.7 ± 3.1

0.81

7.5 ± 2.0

0.45

9.1 ± 2.8

3.4 ± 1.7

n.d.

H7

53

2.9

16.5 ± 5.2

1.09

10.1 ± 3.5

0.89

17.9 ± 7.4

16.1 ± 7.4

n.d.

HV0

45

3.0

17.0 ± 2.0

1.44

13.4 ± 3.8

0.47

9.4 ± 3.3

n.d.

12.4 ± 2.5g

R0a

20

6.1

35.0 ± 6.6

2.85

26.4 ± 9.1

1.50

30.3 ± 12.4

n.d.

n.d.


Concordant estimates (those showing overlapping intervals) are bold.

a Estimate of the time of the most recent common ancestor of each cluster, using the demographic parameter τ inferred from the entire mtDNA control region (nps 16024–16569; 1–576)

b Average number of base substitutions in the mtDNA entire CR (nps 16024–16569; 1–576) or HVS-I (nps 16024–16365) from the ancestral sequence type (rho statistics)

c Estimate of the TMRCA of each cluster, using rho statistics inferred from entire CR or HVS-I sequences

d Estimate of the TMRCA as published in [17] based on HVS-I sequences

e Estimate of the TMRCA as published in [6] based on the mtDNA coding region (nps 577–16023) sequences

f n.d.: not determined

g Estimate was derived for hg V.

Brandstätter et al. BMC Evolutionary Biology 2008 8:191   doi:10.1186/1471-2148-8-191

Open Data