Additional file 10.

Family IS1634. A. Dendrogram displaying relative distances of transposases from family IS1634. Each tree leave indicates the name of the associated element, followed by the host organism and prokaryotic phylum in which the IS was found originally. For a complete description of individual elements please refer to the ISfinder database [15]. B. and C. Alignment of left and right DNA extremities, respectively. Names of corresponding elements are listed in the same order as in A. The blue color scheme represents the percentage of nucleotide identity per column as displayed by black bars. The DNA extremity consensus used in Figure 1 is shown in bottom, together with minimal (black line) and maximal (dashed line) extent of TIRs. IRL, left TIR; IRR, right TIR.

Format: PDF Size: 98KB Download file

This file can be viewed with: Adobe Acrobat Reader

De Palmenaer et al. BMC Evolutionary Biology 2008 8:18   doi:10.1186/1471-2148-8-18