Table 3

Models and parameters

R- Matrix


locus

model

Pinv

alpha

A-C

C-T

A-G

A-T

C-G

G-T


ADH-I intron 5 (with partial flanking exons)

TN93+G

NA

1.41

1.0

3.34

1.0

1.0

5.09

1

GAPD-H exons 4–5 and introns 3–5

TN93+I+G

0.20

1.96

1.0

5.04

1.0

1.0

7.08

1

FGB intron 7

HKY85+G

NA

5.04

1.0

4.03

1.0

1.0

4.03

1

combined nuclear DNA

TN93+G

NA

1.70

1.0

3.92

1.0

1.0

4.98

1

combined mtDNA

GTR+I+G

0.37

0.39

4.50

19.25

3.09

0.34

60.68

1

total combined data

GTR+I+G

0.10

0.55

1.21

4.89

0.80

1.01

9.55

1


Fain and Houde BMC Evolutionary Biology 2007 7:35   doi:10.1186/1471-2148-7-35

Open Data