Table 2

cytochrome b haplotypes used in Figure 3. Haplotype frequency is indicated in brackets when there is more than one.

Haplotype

Taxon

Designation*

Geographic origin

Genbank accession numbers

Author


H01 (12)

L. a. africana

AM1, AM2, QE51, WC4, BO1, DRC11, MO1, NA1, TA1, UG1, UG3, ZI10

Kenya, Uganda, Namibia, Botswana, DRC, Mozambique, Tanzania, Zimbabwe

AY741074, AY741078, AY741076, AY741325, AY742801, AY741323, AY741324, AY742800

SN, Debruyne 2005

H02

L. a. africana

AM12

Kenya

SN

H03

L. a. africana

AN1

Angola

AY741072

Debruyne 2005

H04

L. a. africana

BOT13

Botswana

SN

H05 (6)

L. a. cyclotis, L.a. africana, L. africana

DRC1, DRC4, DRC17**, BOT17, ZI2, ZI4

DRC, Botswana, Zimbabwe

AY359275, AY359277, AY742802, AY741329, AY742799

Debruyne 2005, SN

H06

L. a. africana

BOT18

Botswana

SN

H07

L. a. africana

BOT1

Botswana

SN

H08

L. a. africana

BOT21

Botswana

SN

H09

L. a. africana

BOT25

Botswana

SN

H10

L. a. africana

BOT2

Botswana

SN

H11 (2)

L.a. africana

BOT4, ET1

Botswana

SN

H12

L.a. africana

BOT9

Botswana

SN

H13 (5)

L. a. cyclotis, L.a. africana, L. africana

DRC2, DRC9, DRC13**, KV8, MF5

DRC, Uganda

AY359270, AY359279, AY741081

Debruyne 2005, SN

H14

L. a. cyclotis

DRC3

DRC

AY359271

Debruyne 2005

H15

L. a. cyclotis

DRC5

DRC

AY359276

Debruyne 2005

H16 (22)

Loxodonta africana cyclotis

DRC6, DRC8, Cameroon2, CAR1, Congo2, CAR274, CAR297, CAR3315, CAR3417, CAR405, CAR3723, CAR4311, IVI1012, KES0819, LOP146, NN0713, NN232, NN267, NN279, NN2911, NN3116, NN3218

DRC, Cameroon, CAR, RC, Gabon

AY359268, AY359269, AY359272, AY359273, AY359274

Debruyne 2005, MJ

H17

L. a. cyclotis

Cameroon1

Cameroon

AY359267

Debruyne 2005

H18

L.a. africana

Chad1

Chad

AY741080

Debruyne 2005

H19

L. a. cyclotis

CKT04a14

RC

MJ

H20 (5)

L. a. cyclotis

Congo1, MPA01, MPA02, NOG014, NOG026

RC, Gabon

AY359266

Debruyne 2005, MJ

H21 (3)

L. a. cyclotis

Gabon2, Gabon1, NN255

Gabon, RC

AY359265, AY359278

Debruyne 2005, MJ

H22

L.a. africana

Ivory Coast1

Ivory Coast

AY741327

Debruyne 2005

H23 (2)

L. a. cyclotis

IVI06c4, LOPAFE79

Gabon

MJ

H24

L. a. cyclotis

KES0314

Gabon

MJ

H25 (2)

L.a. africana

Zi5, KG1

Zimbabwe, South Africa

AY741322

SN, Debruyne 2005

H26 (2)

L.a. africana

KG2, SouthAfrica3

South Africa

AY741320

Debruyne 2005, SN

H27

L.a. africana

KV19

Uganda

SN

H28

L.a. africana

KV2

Uganda

SN

H29

L. a. cyclotis

Liberia1

Liberia

AY741079

Debruyne 2005

H30

L.a. africana

MM19

Kenya

SN

H31

L.a. africana

MM20

Kenya

SN

H32

L.a. africana

Namibia2

Namibia

AY741326

Debruyne 2005

H33

L.a. africana

QE48

uganda

SN

H34

L.a. africana

Sudan1

Sudan

AY741073

Debruyne 2005

H35

L.a. africana

WA13

Ghana

SN

H36 (2)

L.a. africana

WA14, WA15

Ghana

SN

H37

L.a. africana

WA6

Ghana

SN

H38

L.a. africana

WC6

Namibia

SN

H39

L.a. africana

Zambia1

Zambia

AY741328

Debruyne 2005

H40

L.a. africana

ZBE1

Zimbabwe

SN

H41

L.a. africana

ZBE3

Zimbabwe

SN

H42

L.a. africana

ZBE4

Zimbabwe

SN

H43

L.a. africana

ZBE5

Zimbabwe

SN

H44

L.a. africana

Zimbabwe1

Zimbabwe

AY741321

Debruyne 2005


* Original name from each author (Debruyne, 2005; this study SN = Silvester Nyakaana and MJ = Mireille Johnson) ** Sample sharing both, forest and savannah haplotypes, according to the author (Debruyne, 2005).

Johnson et al. BMC Evolutionary Biology 2007 7:244   doi:10.1186/1471-2148-7-244

Open Data