Table 1 |
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|
Fungal organisms used in this analysis are listed. Phylum, sub-phylum and classes are shown. *Gene sets were generated in house. |
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|
Species |
Phlum |
Genes |
Citation or sequencing group |
|
|
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|
Candida albicans |
Ascomycota |
6,662 |
[86] |
|
Candida dubliniensis* |
Ascomycota |
6,027 |
Sanger Centre |
|
Candida tropicalis* |
Ascomycota |
6,530 |
Broad-FGI |
|
Candida parapsilosis* |
Ascomycota |
4,891 |
Sanger Centre |
|
Candida lusitaniae* |
Ascomycota |
5,941 |
Broad-FGI |
|
Candida guilliermondii* |
Ascomycota |
5,235 |
Broad-FGI |
|
Debaryomyces hansenii |
Ascomycota |
6,896 |
[49] |
|
Saccharomyces bayanus |
Ascomycota |
4,492 |
[87, 88] |
|
Saccharomyces castellii |
Ascomycota |
4,677 |
[87] |
|
Saccharomyces cerevisiae |
Ascomycota |
5,873 |
[89] |
|
Saccharomyces kudriavzevii |
Ascomycota |
3,768 |
[87] |
|
Saccharomyces mikatae |
Ascomycota |
4,525 |
[87, 88] |
|
Saccharomyces paradoxus |
Ascomycota |
4,788 |
[88] |
|
Candida glabrata |
Ascomycota |
5,272 |
[49] |
|
Kluyveromyces lactis |
Ascomycota |
5,331 |
[49] |
|
Saccharomyces kluyveri |
Ascomycota |
2,968 |
[87] |
|
Kluyveromyces waltii |
Ascomycota |
5,214 |
[90] |
|
Ashbya gossypii |
Ascomycota |
4,718 |
[91] |
|
Yarrowia lipolytica |
Ascomycota |
6,666 |
[49] |
|
Magnaporthe grisea |
Ascomycota |
11,109 |
[92] |
|
Neurospora crassa |
Ascomycota |
10,620 |
[93] |
|
Podospora anserina * |
Ascomycota |
10,443 |
Broad-FGI |
|
Chaetomium globosum |
Ascomycota |
11,124 |
Broad-FGI |
|
Trichoderma reesei * |
Ascomycota |
13,248 |
JGI-DOE |
|
Fusarium graminearum |
Ascomycota |
11,640 |
Broad-FGI |
|
Fusarium verticillioides * |
Ascomycota |
12,751 |
Broad-FGI |
|
Aspergillus oryzae |
Ascomycota |
12,062 |
NITE (Japan) |
|
Aspergillus nidulans |
Ascomycota |
9,541 |
Broad-FGI |
|
Aspergillus fumigatus |
Ascomycota |
9,923 |
TIGR and Sanger Centre |
|
Aspergillus terreus * |
Ascomycota |
10,285 |
Microbia |
|
Uncinocarpus reesii * |
Ascomycota |
6,573 |
Broad-FGI |
|
Histoplasma capsulatum * |
Ascomycota |
6,605 |
Broad-FGI |
|
Coccidioides immitis * |
Ascomycota |
6,622 |
Broad-FGI |
|
Sclerotinia sclerotiorum |
Ascomycota |
14,522 |
Broad-FGI |
|
Botrytis cinerea |
Ascomycota |
16,448 |
Broad-FGI |
|
Stagonospora nodorum |
Ascomycota |
16,597 |
Broad-FGI |
|
Schizosaccharomyces pombe |
Ascomycota |
4,991 |
[94] |
|
|
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|
Coprinus cinereus* |
Basidiomycota |
9,452 |
Broad-FGI |
|
Phanerochaete chrysosporium* |
Basidiomycota |
10,216 |
[95] |
|
Cryptococcus neoformans |
Basidiomycota |
6,594 |
[96] |
|
Ustilago maydis |
Basidiomycota |
6,522 |
Broad-FGI |
|
|
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|
Rhizopus oryzae |
Zygomycota |
17,467 |
Broad-FGI |
|
|
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|
aBroad-FGI, MIT/Harvard Broad Institute, funded through the Fungal Genome Initiative; JGI-DOE, Department of Energy Joint Genome Institute, Walnut Creek, California; Microbia, Cambridge, Massachusetts; Sanger Caenter, Wellcome Trust Sanger Center, Hinxton, Cambridge, United Kingdom. |
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|
Fitzpatrick et al. BMC Evolutionary Biology 2006 6:99 doi:10.1186/1471-2148-6-99 |
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