Table 3 |
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Comparison between 18S rRNA and RPB gene phylogenies in the topology and statistical support for the major clades. |
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Major clade |
18S rDNA |
RPB1+RPB2 |
|
|
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|
Monophyletic Ascomycota |
100%, 75% a |
100%, 99% |
|
Monophyletic Basidiomycota |
100%, 89% |
100%, 100% |
|
Monophyletic Dikaryomycota |
100%, 89% |
100%, 100% |
|
Monophyletic Zygomycota |
No (polyphyletic) |
100%, 78% |
|
Clade of Asco-, Basidio- and Zygomycota |
No b |
100%, 84% |
|
Monophyletic Chytridiomycota |
No (polyphyletic) |
No (paraphyletic) |
|
Monophyletic kingdom Fungi |
72%, 71% |
100%, 91% |
|
Microsporidia sister to Fungi |
Noc |
100%, 99% |
|
|
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|
a. The numbers are the values of Bayesian posterior probability and parsimony bootstrap support respectively. b. Zygomycota did not form a clade with Ascomycota and Basidiomycota in the 18S rDNA phylogeny (Figure 2A). c. Microsporidia is not included in the phylogenetic analyses based on 18S rDNA (Figure 2A) due to highly divergence of the sequences and difficulty in the alignment. |
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Liu et al. BMC Evolutionary Biology 2006 6:74 doi:10.1186/1471-2148-6-74 |
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