|
Parameter estimates used to calculate the percentage diversity that survived transmission |
||||
| Parameter |
Meana |
HPDb Lower |
HPD Upper |
ESSc |
|
|
||||
| env V1-V4 |
||||
|
|
||||
| NRτ |
1216.7 |
534.4 |
2033.9 |
1338.94 |
| NDτ |
1014.0 |
541.2 |
1538.0 |
955.71 |
| ttransd |
30.9 |
15.2 |
46.9 |
174.57 |
| NRτ(ttrans) |
1.6 |
1.0 |
3.1 |
2456.87 |
| δ |
0.17 |
0.06 |
0.35 |
2043.08 |
| gag p24 |
||||
|
|
||||
| NRτ |
926.6 |
419.9 |
1512.6 |
1454.31 |
| NDτ |
770.7 |
413.5 |
1184.7 |
1356.90 |
| ttransd |
42.4 |
27.5 |
53.0 |
274.51 |
| NRτ(ttrans) |
2.0 |
1.0 |
4.5 |
3532.69 |
| δ |
0.29 |
0.07 |
0.67 |
3310.56 |
|
aMean of the marginal posterior probability distribution of parameter values bHighest Posterior Density encompassing 95% of the marginal posterior distribution of parameter values cEffective Sample Size (number of independent samples taken from the posterior distribution of values for a particular parameter) dEstimated time of transmission in days prior to the day of the fist recipient sample (day 0) | ||||
Edwards et al. BMC Evolutionary Biology 2006 6:28 doi:10.1186/1471-2148-6-28 |
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