Table 1

Rat PSG genes: nomenclature and references. Previously and newly identified rat PSG genes are listed with GenBank references. Where the GNOMON predicted sequence in GenBank differs from our prediction this is denoted by a single asterix beside the nucleotide accession number. A double asterix indicates the prediction of a putative splice variant with an alternative leader and N1-domain exon.

gene name

alternative/ old name

accession number (nucleotide)

accession number (protein)

NW_047566.1 contig (CDS start and end positions and orientation)

Notes


PSG36

CGM1

NM_012702

XP_218391

947162 – 958811 (F)

PSG37

CGM3

NM_019126

NP_061999

1543892 – 1552811 (R)

PSG38

similar to brain CEA

XM_214842*

XP_214842

859024 – 870967 (F)

PSG39

CGM6

XM_218398

XP_218398

1562043 – 1571612 (R)

PSG40

CGM8

NM_021677**

NP_067709

1009499 – 1015560 (F)

putative novel splice variant

PSG41

XM_218390*

XP_218390

888980 – 904807 (F)

PSG42

1108370 – 1118331 (F)

PSG43

1149404 – 1185428 (F)


McLellan et al. BMC Evolutionary Biology 2005 5:39   doi:10.1186/1471-2148-5-39

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