Table 3

Properties of amicronucleates closely related to T. thermophila
Identity to T. thermophila type SB210
Species Location # sites # isolates # cox1 haplotypes Pairwise identity among isolates cox1 D2 SSU actin Self-splicing LSU intron
nsp15a WPA 2 6 1 100% 90.8% nda 100% 100% absent
nsp15b ANF 4 7 1 100% 92.2% 100% 100% 99.8% absent
nsp25 NH 2 2 2 99.2% 94.8% nd 100% 100% present
T. thermophila amic WPA 3 5 3 99.1% 99.3% 100% 100% 99.9% present

D2, 190 nucleotide region of large ribosomal subunit RNA.

SSU, nuclear small ribosomal RNA.

WPA, western Pennsylvania.

ANF, Allegheny National Forest.

NH, New Hampshire.

aNot determined.

Doerder

Doerder BMC Evolutionary Biology 2014 14:112   doi:10.1186/1471-2148-14-112

Open Data